myRT

myRT report for GCA_008668375.1_ASM866837v1

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Seq: RQCJ01000161.1 Clostridia bacterium isolate S10A.meta.bin_5 k141_13399, whole genome shotgun sequence (44880 bp)
Overview 1 RT 1: 30256-35093 bp Neighborhood of RT #1 [30256, 35101] Avd_like RVT-DGRs PIN_LabA-like_N_1 PurR Feature: gene Location: 30256-30726 bp Feature: domain Description: Avd_like Location: 30304-30637 bp Feature: domain Description: Avd_like Location: 30304-30637 bp Feature: gene Location: 30751-30909 bp Feature: gene Location: 30940-32166 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31276-31966 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31 276-31 966 bp Feature: gene Location: 32506-33864 bp Feature: domain Description: PIN_LabA-like_N_1 Location: 33292-33520 bp Feature: domain Description: PIN_LabA-like_N_1 Location: 33292-33520 bp Feature: gene Location: 34073-35101 bp Feature: domain Description: PurR Location: 34091-35093 bp Feature: domain Description: PurR Location: 34091 -35093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, PIN_LabA-like_N_1 (cd11297), PurR (COG1609)

Seq: RQCJ01000019.1 Clostridia bacterium isolate S10A.meta.bin_5 k141_75075, whole genome shotgun sequence (34469 bp)
Overview 1 RT 1: 9284-13637 bp Neighborhood of RT #1 [9284, 13702] PHA02517 DUF3899 RVT-GII GIIM AppF AppF Feature: gene Location: 9284-9820 bp Feature: domain Description: PHA02517 Location: 9293-9797 bp Feature: domain Description: PHA02 517 Location: 92 93-9797 bp Feature: gene Location: 10061-10477 bp Feature: domain Description: DUF3899 Location: 10205-10457 bp Feature: domain Description: DUF3899 Location: 102 05-10457 bp Feature: gene Location: 10543-11976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10861-11485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10861-11485 bp Feature: domain Description: GIIM Note: maturase Location: 11545-11767 bp Feature: domain Description: GIIM Note: maturase Location: 11545-11767 bp Feature: gene Location: 12225-12389 bp Feature: gene Location: 12524-13702 bp Feature: domain Description: AppF Location: 12539-12869 bp Feature: domain Description: AppF Location: 12 539-12 869 bp Feature: domain Description: AppF Location: 13013-13637 bp Feature: domain Description: AppF Location: 13013-13637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3899 (pfam13038), RVT-GII, GIIM (pfam08388), AppF (COG4608), PHA02517 (putative transposase OrfB; Reviewed)