myRT

myRT report for GCA_008669035.1_ASM866903v1

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Seq: RQAL01000142.1 Ruminococcus faecis isolate S08B.meta.bin_2 k141_40358, whole genome shotgun sequence (21445 bp)
Overview 1 RT 1: 1-1898 bp Neighborhood of RT #1 [1, 1960] RVT-GII HTH_ARSR Feature: gene Location: 1-1332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292-982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292-982 bp Feature: gene Location: 1414-1608 bp Feature: gene Location: 1664-1960 bp Feature: domain Description: HTH_ARSR Location: 1694-1898 bp Feature: domain Description: HTH_ARSR Location: 1 694-1 898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_ARSR (smart00418)

Seq: RQAL01000011.1 Ruminococcus faecis isolate S08B.meta.bin_2 k141_7356, whole genome shotgun sequence (20762 bp)
Overview 1 RT 1: 16618-20626 bp Neighborhood of RT #1 [16618, 20626] XRE DBD_HTH RVT-GII Intron_maturas2 HNHc Feature: gene Location: 16618-17007 bp Feature: domain Description: XRE Location: 16705-16879 bp Feature: domain Description: XRE Location: 16705-16879 bp Feature: domain Description: DBD_HTH Location: 16903-16993 bp Feature: domain Description: DBD_HTH Location: 16903-16993 bp Feature: gene Location: 17209-18144 bp Feature: gene Location: 18375-20177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18642-19458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18642 -19458 bp Feature: domain Description: Intron_maturas2 Location: 19614-19833 bp Feature: domain Description: Intron_maturas2 Location: 19614-19833 bp Feature: domain Description: HNHc Note: nucleases Location: 20007-20157 bp Feature: domain Description: HNHc Note: nucleases Location: 2 0007-2 0157 bp Feature: gene Location: 20150-20626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XRE (COG1476), DBD_HTH (pfam18430), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)