myRT

myRT report for GCA_008671615.1_ASM867161v1

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Seq: RPXZ01000073.1 Blautia sp. isolate S06A.meta.bin_2 k141_10702, whole genome shotgun sequence (26066 bp)
Overview 1 RT 1: 1-7733 bp Neighborhood of RT #1 [1, 7774] YtxK COG4646 RVT-GII HNHc COG4646 KOG0390 MobC Feature: gene Location: 1-2685 bp Feature: domain Description: YtxK Location: 40-592 bp Feature: domain Description: YtxK Location: 40-592 bp Feature: domain Description: COG4646 Location: 661-2671 bp Feature: domain Description: COG4646 Location: 661 -2671 bp Feature: gene Location: 3385-5301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3709-4423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3709-4423 bp Feature: domain Description: HNHc Note: nucleases Location: 5053-5224 bp Feature: domain Description: HNHc Note: nucleases Location: 5053-5224 bp Feature: gene Location: 5511-7445 bp Feature: domain Description: COG4646 Location: 5523-6093 bp Feature: domain Description: COG4646 Location: 5523-6093 bp Feature: domain Description: KOG0390 Location: 6363-6621 bp Feature: domain Description: KOG0390 Location: 6363-6621 bp Feature: gene Location: 7442-7774 bp Feature: domain Description: MobC Location: 7622-7733 bp Feature: domain Description: MobC Location: 7622-7733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, HNHc (smart00507), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), MobC (pfam05713)

Seq: RPXZ01000032.1 Blautia sp. isolate S06A.meta.bin_2 k141_13168, whole genome shotgun sequence (3350 bp)
Overview 1 RT 1: 594-3174 bp Neighborhood of RT #1 [594, 3347] Maff2 RVT-GII Feature: gene Location: 594-809 bp Feature: domain Description: Maff2 Location: 597-804 bp Feature: domain Description: Maff2 Location: 597-804 bp Feature: gene Location: 829-1503 bp Feature: gene Location: 2079-3347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2343-3174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 343-3174 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Maff2 (pfam12750)

Seq: RPXZ01000209.1 Blautia sp. isolate S06A.meta.bin_2 k141_17597, whole genome shotgun sequence (19617 bp)
Overview 1 RT 1: 2359-7952 bp Neighborhood of RT #1 [2359, 7963] MurNAc-LAA PenP Beta-lactamase2 RVT-GII GIIM InsQ Feature: gene Location: 2359-3381 bp Feature: domain Description: MurNAc-LAA Location: 2764-3364 bp Feature: domain Description: MurNAc-LAA Location: 2764-3 3 64 bp Feature: gene Location: 3403-4557 bp Feature: domain Description: PenP Location: 3751-3988 bp Feature: domain Description: PenP Location: 3 751-3 988 bp Feature: domain Description: Beta-lactamase2 Location: 4018-4444 bp Feature: domain Description: Beta-lactamase2 Location: 4018-4444 bp Feature: gene Location: 4654-6045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4969-5593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4969-5593 bp Feature: domain Description: GIIM Note: maturase Location: 5650-5866 bp Feature: domain Description: GIIM Note: maturase Location: 5650-5866 bp Feature: gene Location: 6246-6491 bp Feature: gene Location: 6866-7963 bp Feature: domain Description: InsQ Location: 6869-7952 bp Feature: domain Description: InsQ Location: 6869-7952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MurNAc-LAA (cl02713), PenP (COG2367), Beta-lactamase2 (pfam13354), RVT-GII, GIIM (pfam08388), InsQ (COG0675)

Seq: RPXZ01000101.1 Blautia sp. isolate S06A.meta.bin_2 k141_64862, whole genome shotgun sequence (14176 bp)
Overview 1 RT 1: 11541-14173 bp Neighborhood of RT #1 [11541, 14173] ThiF RVT-Retrons Feature: gene Location: 11541-12212 bp Feature: domain Description: ThiF Location: 11586-12159 bp Feature: domain Description: ThiF Location: 11586-12159 bp Feature: gene Location: 12215-12415 bp Feature: gene Location: 12755-13894 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13016-13610 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13016-13610 bp Feature: gene Location: 13952-14173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ThiF (pfam00899), RVT-Retrons

Seq: RPXZ01000194.1 Blautia sp. isolate S06A.meta.bin_2 k141_67147, whole genome shotgun sequence (23986 bp)
Overview 1 RT 1: 15435-19751 bp Neighborhood of RT #1 [15435, 19831] RVT-DGRs ABC_trans_CmpB Feature: gene Location: 15435-16367 bp Feature: gene Location: 16443-16994 bp Feature: gene Location: 17245-18558 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 17500-18295 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 175 00-18295 bp Feature: gene Location: 18760-19314 bp Feature: gene Location: 19388-19831 bp Feature: domain Description: ABC_trans_CmpB Location: 19451-19751 bp Feature: domain Description: ABC_trans_CmpB Location: 1945 1-1975 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, ABC_trans_CmpB (pfam06541)