myRT

myRT report for GCA_008671775.1_ASM867177v1

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Seq: RPXR01000094.1 [Eubacterium] siraeum isolate S05C.meta.bin_3 k141_22171, whole genome shotgun sequence (3419 bp)
Overview 1 RT 1: 3-3397 bp Neighborhood of RT #1 [3, 3417] Bac_Flav_CT_N RVT-GII Intron_maturas2 Bac_Flav_CT_N Feature: gene Location: 3-683 bp Feature: domain Description: Bac_Flav_CT_N Location: 129-681 bp Feature: domain Description: Bac_Flav_CT_N Location: 1 29-681 bp Feature: gene Location: 673-2484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 937-1759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 937-1 759 bp Feature: domain Description: Intron_maturas2 Location: 1828-2137 bp Feature: domain Description: Intron_maturas2 Location: 1 828-21 37 bp Feature: gene Location: 2519-2854 bp Feature: gene Location: 3025-3417 bp Feature: domain Description: Bac_Flav_CT_N Location: 3133-3397 bp Feature: domain Description: Bac_Flav_CT_N Location: 31 33-3397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_N (TIGR03780), RVT-GII, Intron_maturas2 (pfam01348)

Seq: RPXR01000187.1 [Eubacterium] siraeum isolate S05C.meta.bin_3 k141_27391, whole genome shotgun sequence (5229 bp)
Overview 1 RT 1: 1429-5210 bp Neighborhood of RT #1 [1429, 5227] COG3943 RVT-GII Intron_maturas2 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 1429-1791 bp Feature: domain Description: COG3943 Location: 1468-1717 bp Feature: domain Description: COG3943 Location: 1468-1717 bp Feature: gene Location: 1804-2004 bp Feature: gene Location: 2006-3814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2270-3092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 70-3092 bp Feature: domain Description: Intron_maturas2 Location: 3203-3473 bp Feature: domain Description: Intron_maturas2 Location: 32 03-3473 bp Feature: gene Location: 4361-5227 bp Feature: domain Description: Phage_int_SAM_5 Location: 4385-4703 bp Feature: domain Description: Phage_int_SAM_5 Location: 4385-4703 bp Feature: domain Description: INTN1_C_like Location: 4742-5210 bp Feature: domain Description: INTN1_C_like Location: 4742 -52 10 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3943 (Uncharacterized conserved protein ), RVT-GII, Intron_maturas2 (pfam01348), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: RPXR01000182.1 [Eubacterium] siraeum isolate S05C.meta.bin_3 k141_2744, whole genome shotgun sequence (7472 bp)
Overview 1 RT 1: 4775-7162 bp Neighborhood of RT #1 [4775, 7470] Phage_int_SAM_3 INT_ICEBs1_C_like RVT-Retrons Feature: gene Location: 4775-5146 bp Feature: gene Location: 4733-6238 bp Feature: domain Description: Phage_int_SAM_3 Location: 4955-5120 bp Feature: domain Description: Phage_int_SAM_3 Location: 4955-5120 bp Feature: domain Description: INT_ICEBs1_C_like Location: 5318-5822 bp Feature: domain Description: INT_ICEBs1_C_like Location: 53 18-5822 bp Feature: gene Location: 6439-7470 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6562-7162 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6562-7162 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), RVT-Retrons

Seq: RPXR01000098.1 [Eubacterium] siraeum isolate S05C.meta.bin_3 k141_47333, whole genome shotgun sequence (3126 bp)
Overview 1 RT 1: 58-3124 bp Neighborhood of RT #1 [58, 3124] RVT_N RVT-GII GIIM Feature: gene Location: 58-333 bp Feature: gene Location: 493-630 bp Feature: gene Location: 970-2622 bp Feature: RT Description: RVT_N Location: 1024-1267 bp Feature: RT Description: RVT_N Location: 1024 -1267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1312-1960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1312-1960 bp Feature: domain Description: GIIM Note: maturase Location: 2014-2245 bp Feature: domain Description: GIIM Note: maturase Location: 2014 -224 5 bp Feature: gene Location: 2543-3124 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)