myRT

myRT report for GCA_008671935.1_ASM867193v1

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Seq: RPXJ01000022.1 Clostridia bacterium isolate S05B.meta.bin_4 k141_1515, whole genome shotgun sequence (3528 bp)
Overview 1 RT 1: 3-3124 bp Neighborhood of RT #1 [3, 3124] HTH_XRE RVT-GII Feature: gene Location: 3-197 bp Feature: gene Location: 254-1060 bp Feature: domain Description: HTH_XRE Location: 281-452 bp Feature: domain Description: HTH_XRE Location: 281 -452 bp Feature: gene Location: 1236-2531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1491-2181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 491 -21 81 bp Feature: gene Location: 2584-2829 bp Feature: gene Location: 2960-3124 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_XRE (smart00530)

Seq: RPXJ01000117.1 Clostridia bacterium isolate S05B.meta.bin_4 k141_31185, whole genome shotgun sequence (3971 bp)
Overview 1 RT 1: 153-3515 bp Neighborhood of RT #1 [153, 3856] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII Intron_maturas2 Feature: gene Location: 153-326 bp Feature: gene Location: 332-1501 bp Feature: domain Description: Arm-DNA-bind_5 Location: 362-617 bp Feature: domain Description: Arm-DNA-bind_5 Location: 362 -617 bp Feature: domain Description: Phage_int_SAM_5 Location: 656-977 bp Feature: domain Description: Phage_int_SAM_5 Location: 656-977 bp Feature: domain Description: INTN1_C_like Location: 1016-1484 bp Feature: domain Description: INTN1_C_like Location: 1016-1484 bp Feature: gene Location: 2048-3856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2312-3134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 312 -3134 bp Feature: domain Description: Intron_maturas2 Location: 3245-3515 bp Feature: domain Description: Intron_maturas2 Location: 32 45-3515 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: RPXJ01000224.1 Clostridia bacterium isolate S05B.meta.bin_4 k141_96895, whole genome shotgun sequence (2589 bp)
Overview 1 RT 1: 3-1795 bp Neighborhood of RT #1 [3, 1881] IclR RVT-GII GIIM Feature: gene Location: 3-410 bp Feature: domain Description: IclR Location: 33-372 bp Feature: domain Description: IclR Location: 3 3 -3 72 bp Feature: gene Location: 559-1881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826-1519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826-1519 bp Feature: domain Description: GIIM Note: maturase Location: 1606-1795 bp Feature: domain Description: GIIM Note: maturase Location: 1606-1795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IclR (pfam01614), RVT-GII, GIIM (pfam08388)