myRT

myRT report for GCA_008672705.1_ASM867270v1

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Seq: RPVW01000049.1 Bacteroides vulgatus isolate S04A.meta.bin_12 k141_12432, whole genome shotgun sequence (6278 bp)
Overview 1 RT 1: 1273-6015 bp Neighborhood of RT #1 [1273, 6275] DNA_pol_A DNA_pol_A RVT-UG9 ComA-like_MBL-fold ComA-like_MBL-fold Feature: gene Location: 1273-1467 bp Feature: gene Location: 1497-2936 bp Feature: domain Description: DNA_pol_A Location: 2157-2550 bp Feature: domain Description: DNA_pol_A Location: 21 57-2550 bp Feature: domain Description: DNA_pol_A Location: 2685-2832 bp Feature: domain Description: DNA_pol_A Location: 2685-2832 bp Feature: gene Location: 2933-5314 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 3851-4466 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 3851 -4466 bp Feature: gene Location: 5289-6275 bp Feature: domain Description: ComA-like_MBL-fold Location: 5334-5598 bp Feature: domain Description: ComA-like_MBL-fold Location: 5334-5598 bp Feature: domain Description: ComA-like_MBL-fold Location: 5847-6015 bp Feature: domain Description: ComA-like_MBL-fold Location: 5847-601 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_pol_A (pfam00476), RVT-UG9, ComA-like_MBL-fold (cd07731)

Seq: RPVW01000070.1 Bacteroides vulgatus isolate S04A.meta.bin_12 k141_19154, whole genome shotgun sequence (20713 bp)
Overview 1 RT 1: 4376-9620 bp Neighborhood of RT #1 [4376, 9646] YWFCY RVT-GII Intron_maturas2 HNHc TraG-D_C RibD_C Feature: gene Location: 4376-5107 bp Feature: domain Description: YWFCY Location: 4382-4559 bp Feature: domain Description: YWFCY Location: 4382 -4559 bp Feature: gene Location: 5366-5617 bp Feature: gene Location: 5654-7486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5939-6758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5939-6758 bp Feature: domain Description: Intron_maturas2 Location: 6833-7142 bp Feature: domain Description: Intron_maturas2 Location: 6833-7142 bp Feature: domain Description: HNHc Note: nucleases Location: 7316-7460 bp Feature: domain Description: HNHc Note: nucleases Location: 7316-7460 bp Feature: gene Location: 7473-8930 bp Feature: domain Description: TraG-D_C Location: 8274-8610 bp Feature: domain Description: TraG-D_C Location: 82 74-8610 bp Feature: gene Location: 9152-9646 bp Feature: domain Description: RibD_C Location: 9458-9620 bp Feature: domain Description: RibD_C Location: 9458-962 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YWFCY (pfam14293), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696), RibD_C (pfam01872)

Seq: RPVW01000593.1 Bacteroides vulgatus isolate S04A.meta.bin_12 k141_2281, whole genome shotgun sequence (4133 bp)
Overview 1 RT 1: 16-4071 bp Neighborhood of RT #1 [16, 4130] Bac_Flav_CT_J RVT-GII Intron_maturas2 HNHc DUF4141 Feature: gene Location: 16-1017 bp Feature: domain Description: Bac_Flav_CT_J Location: 43-1006 bp Feature: domain Description: Bac_Flav_CT_J Location: 43 -1006 bp Feature: gene Location: 1033-1569 bp Feature: gene Location: 1562-3397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1856-2678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1856-2678 bp Feature: domain Description: Intron_maturas2 Location: 2837-3206 bp Feature: domain Description: Intron_maturas2 Location: 283 7-3 206 bp Feature: domain Description: HNHc Note: nucleases Location: 3230-3371 bp Feature: domain Description: HNHc Note: nucleases Location: 3 23 0-3 3 71 bp Feature: gene Location: 3717-3878 bp Feature: gene Location: 3918-4130 bp Feature: domain Description: DUF4141 Location: 3921-4071 bp Feature: domain Description: DUF4141 Location: 3 921-4071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_J (TIGR03782), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4141 (pfam13605)

Seq: RPVW01000146.1 Bacteroides vulgatus isolate S04A.meta.bin_12 k141_24611, whole genome shotgun sequence (6146 bp)
Overview 1 RT 1: 1644-5362 bp Neighborhood of RT #1 [1644, 5362] AAA_24 RVT-DGRs Feature: gene Location: 1644-2531 bp Feature: domain Description: AAA_24 Location: 1689-2214 bp Feature: domain Description: AAA_24 Location: 1689-2214 bp Feature: gene Location: 2550-2786 bp Feature: gene Location: 3202-4188 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3412-3997 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 34 12-3997 bp Feature: gene Location: 4394-4867 bp Feature: gene Location: 4886-5362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_24 (pfam13479), RVT-DGRs

Seq: RPVW01000209.1 Bacteroides vulgatus isolate S04A.meta.bin_12 k141_27662, whole genome shotgun sequence (14195 bp)
Overview 1 RT 1: 1-3508 bp Neighborhood of RT #1 [1, 3987] RVT-GII Intron_maturas2 AAA_25 Feature: gene Location: 1-255 bp Feature: gene Location: 245-2053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509-1331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 09-1331 bp Feature: domain Description: Intron_maturas2 Location: 1409-1712 bp Feature: domain Description: Intron_maturas2 Location: 1409-1712 bp Feature: gene Location: 2599-2781 bp Feature: gene Location: 2887-3987 bp Feature: domain Description: AAA_25 Location: 2995-3508 bp Feature: domain Description: AAA_25 Location: 2995 -35 08 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), AAA_25 (pfam13481)

Seq: RPVW01000117.1 Bacteroides vulgatus isolate S04A.meta.bin_12 k141_32870, whole genome shotgun sequence (4598 bp)
Overview 1 RT 1: 2-4338 bp Neighborhood of RT #1 [2, 4338] Methyltransf_31 RVT-GII RVT-GII Feature: gene Location: 2-799 bp Feature: domain Description: Methyltransf_31 Location: 386-707 bp Feature: domain Description: Methyltransf_31 Location: 386 -707 bp Feature: gene Location: 891-2186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1146-1836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1146 -1836 bp Feature: gene Location: 2780-4075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3035-3725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3035-3725 bp Feature: gene Location: 4189-4338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_31 (pfam13847), RVT-GII

Seq: RPVW01000031.1 Bacteroides vulgatus isolate S04A.meta.bin_12 k141_37627, whole genome shotgun sequence (5026 bp)
Overview 1 RT 1: 1911-4723 bp Neighborhood of RT #1 [1911, 4723] Mor RVT-DGRs Feature: gene Location: 1911-2153 bp Feature: domain Description: Mor Location: 2004-2130 bp Feature: domain Description: Mor Location: 2004-2130 bp Feature: gene Location: 2332-2817 bp Feature: gene Location: 2814-4115 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3024-3624 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3024-3624 bp Feature: gene Location: 4219-4476 bp Feature: gene Location: 4490-4723 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mor (pfam08765), RVT-DGRs

Seq: RPVW01000065.1 Bacteroides vulgatus isolate S04A.meta.bin_12 k141_54802, whole genome shotgun sequence (33334 bp)
Overview 1 RT 1: 20171-26247 bp Neighborhood of RT #1 [20171, 26264] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Feature: gene Location: 20171-21220 bp Feature: gene Location: 21242-21877 bp Feature: domain Description: Bac_Flav_CT_G Location: 21293-21863 bp Feature: domain Description: Bac_Flav_CT_G Location: 21293-218 63 bp Feature: gene Location: 21937-23769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22222-23044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22222-23044 bp Feature: domain Description: Intron_maturas2 Location: 23113-23440 bp Feature: domain Description: Intron_maturas2 Location: 23113-23440 bp Feature: domain Description: HNHc Note: nucleases Location: 23590-23740 bp Feature: domain Description: HNHc Note: nucleases Location: 23590-23740 bp Feature: gene Location: 23961-24149 bp Feature: gene Location: 24327-26264 bp Feature: domain Description: Bac_Flav_CT_G Location: 24330-26247 bp Feature: domain Description: Bac_Flav_CT_G Location: 24330-26247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)