myRT

myRT report for GCA_008673585.1_ASM867358v1

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Seq: RPUD01000110.1 Clostridia bacterium isolate S02B.meta.bin_6 k141_22006, whole genome shotgun sequence (22710 bp)
Overview 1 RT 1: 13249-22703 bp Neighborhood of RT #1 [13249, 22708] YtxK COG4646 RVT-GII HNHc COG4646 SR_TndX_transposase Recombinase Feature: gene Location: 13249-18330 bp Feature: domain Description: YtxK Location: 16135-16726 bp Feature: domain Description: YtxK Location: 1 61 35-1 6726 bp Feature: domain Description: COG4646 Location: 16795-18295 bp Feature: domain Description: COG4646 Location: 1 6795-1 8295 bp Feature: gene Location: 18461-18592 bp Feature: gene Location: 19028-20911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19346-20075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9346-20075 bp Feature: domain Description: HNHc Note: nucleases Location: 20627-20795 bp Feature: domain Description: HNHc Note: nucleases Location: 20627-20795 bp Feature: gene Location: 21081-21872 bp Feature: domain Description: COG4646 Location: 21084-21846 bp Feature: domain Description: COG4646 Location: 21 084-21 846 bp Feature: gene Location: 21920-22708 bp Feature: domain Description: SR_TndX_transposase Location: 21944-22361 bp Feature: domain Description: SR_TndX_transposase Location: 21 944-22361 bp Feature: domain Description: Recombinase Location: 22466-22703 bp Feature: domain Description: Recombinase Location: 22466-22703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, HNHc (smart00507), SR_TndX_transposase (cd03770), Recombinase (pfam07508)

Seq: RPUD01000069.1 Clostridia bacterium isolate S02B.meta.bin_6 k141_22742, whole genome shotgun sequence (47081 bp)
Overview 1 RT 1: 43017-45935 bp Neighborhood of RT #1 [43017, 46276] ParM_like RVT-UG2 Feature: gene Location: 43017-43943 bp Feature: domain Description: ParM_like Location: 43044-43899 bp Feature: domain Description: ParM_like Location: 43044-43899 bp Feature: gene Location: 43994-44143 bp Feature: gene Location: 44897-46276 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 45092-45935 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 45092 -45935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParM_like (cd10227), RVT-UG2

Seq: RPUD01000055.1 Clostridia bacterium isolate S02B.meta.bin_6 k141_76061, whole genome shotgun sequence (41912 bp)
Overview 1 RT 1: 30102-34266 bp Neighborhood of RT #1 [30102, 34266] FBPase_2 RVT-GII GIIM Feature: gene Location: 30102-32078 bp Feature: domain Description: FBPase_2 Location: 30135-32046 bp Feature: domain Description: FBPase_2 Location: 3 013 5-3 2046 bp Feature: gene Location: 32175-32333 bp Feature: gene Location: 32423-33856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32741-33365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 2741-3 3 3 65 bp Feature: domain Description: GIIM Note: maturase Location: 33425-33647 bp Feature: domain Description: GIIM Note: maturase Location: 3 3 425-3 3 647 bp Feature: gene Location: 33928-34095 bp Feature: gene Location: 34102-34266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FBPase_2 (pfam06874), RVT-GII, GIIM (pfam08388)