myRT

myRT report for GCA_008673855.1_ASM867385v1

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Seq: RPTS01000074.1 Fusicatenibacter saccharivorans isolate S02A.meta.bin_4 k141_38219, whole genome shotgun sequence (47483 bp)
Overview 1 RT 1: 10340-16546 bp Neighborhood of RT #1 [10340, 16593] HTH_28 HTH_28 HTH_28 PHA02517 DDE_Tnp_IS66 DDE_Tnp_IS66_C AAAA RVT-GII PHA02517 IstB_IS21 Feature: gene Location: 10340-13078 bp Feature: domain Description: HTH_28 Location: 10373-10508 bp Feature: domain Description: HTH_28 Location: 1 0373-1 0508 bp Feature: domain Description: HTH_28 Location: 10547-10670 bp Feature: domain Description: HTH_28 Location: 1 0547-1 0670 bp Feature: domain Description: HTH_28 Location: 10742-10889 bp Feature: domain Description: HTH_28 Location: 1 0742-1 0889 bp Feature: domain Description: PHA02517 Location: 11120-11903 bp Feature: domain Description: PHA0251 7 Location: 1 1 1 20-1 1 903 bp Feature: domain Description: DDE_Tnp_IS66 Location: 11972-12806 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 1 972-1 2806 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 12830-12953 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 2830-1 2953 bp Feature: gene Location: 13338-14735 bp Feature: domain Description: AAAA Location: 13347-14565 bp Feature: domain Description: AAAA Location: 1 3347-1 4565 bp Feature: gene Location: 15268-15747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15478-15679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5478-1 5679 bp Feature: gene Location: 15684-16331 bp Feature: domain Description: PHA02517 Location: 15756-16296 bp Feature: domain Description: PHA0251 7 Location: 1 5756-1 6296 bp Feature: gene Location: 16354-16593 bp Feature: domain Description: IstB_IS21 Location: 16360-16546 bp Feature: domain Description: IstB_IS21 Location: 1 6360-1 6546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_28 (pfam13518), PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), AAAA (COG1672), RVT-GII, IstB_IS21 (pfam01695)