myRT

myRT report for GCA_008679555.1_ASM867955v1

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Seq: NAMY01000002.1 Firmicutes bacterium isolate LMAG:85 MEG_85_2, whole genome shotgun sequence (1238576 bp)
Overview 1 RT 1: 392784-397093 bp 2 RT 2: 748817-754858 bp 3 RT 3: 812044-820709 bp Neighborhood of RT #1 [392784, 397101] RVT-GII GIIM RAYT PRK08198 Neighborhood of RT #2 [748817, 754941] RsmG MnmG RVT-GII GIIM PRK09273 YabE 3D_containing_proteins Neighborhood of RT #3 [812044, 820744] RVT-UG10 MutT_pyrophosphohydrolase PLDc_N_DEXD_b2 SSL2 DUF3427 Feature: gene Location: 392784-392930 bp Feature: gene Location: 393082-393276 bp Feature: gene Location: 393384-394667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 393588-394203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 393588-394203 bp Feature: domain Description: GIIM Note: maturase Location: 394263-394494 bp Feature: domain Description: GIIM Note: maturase Location: 394263-394494 bp Feature: gene Location: 395275-395745 bp Feature: domain Description: RAYT Location: 395308-395695 bp Feature: domain Description: RAYT Location: 395308-395695 bp Feature: gene Location: 395899-397101 bp Feature: domain Description: PRK08198 Location: 395902-397093 bp Feature: domain Description: PRK081 98 Location: 395902-397093 bp Feature: gene Location: 748817-749521 bp Feature: domain Description: RsmG Location: 748838-749465 bp Feature: domain Description: RsmG Location: 748838-749465 bp Feature: gene Location: 749524-751425 bp Feature: domain Description: MnmG Location: 749563-751414 bp Feature: domain Description: MnmG Location: 749563-751 41 4 bp Feature: gene Location: 751559-752842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 751763-752378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 751 763-752378 bp Feature: domain Description: GIIM Note: maturase Location: 752438-752669 bp Feature: domain Description: GIIM Note: maturase Location: 752438-752669 bp Feature: gene Location: 753348-753962 bp Feature: domain Description: PRK09273 Location: 753351-753948 bp Feature: domain Description: PRK09273 Location: 753351 -753948 bp Feature: gene Location: 754012-754941 bp Feature: domain Description: YabE Location: 754144-754552 bp Feature: domain Description: YabE Location: 7541 44-754552 bp Feature: domain Description: 3D_containing_proteins Location: 754576-754858 bp Feature: domain Description: 3D_containing_proteins Location: 754576-754858 bp Feature: gene Location: 812044-812217 bp Feature: gene Location: 812279-814564 bp Feature: gene Location: 814837-817320 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 816166-816784 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 81 61 66-81 6784 bp Feature: gene Location: 817347-817751 bp Feature: domain Description: MutT_pyrophosphohydrolase Location: 817359-817734 bp Feature: domain Description: MutT_pyrophosphohydrolase Location: 81 7359-81 7734 bp Feature: gene Location: 817748-820744 bp Feature: domain Description: PLDc_N_DEXD_b2 Location: 817874-818294 bp Feature: domain Description: PLDc_N_DEXD_b2 Location: 81 7874-81 8294 bp Feature: domain Description: SSL2 Location: 818354-819596 bp Feature: domain Description: SSL2 Location: 81 8354-81 9596 bp Feature: domain Description: DUF3427 Location: 819872-820709 bp Feature: domain Description: DUF3427 Location: 81 9872-820709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RAYT (COG1943), PRK08198 (threonine dehydratase; Provisional), RsmG (COG0357), MnmG (COG0445), PRK09273 (hypothetical protein; Provisional), YabE (COG3583), 3D_containing_proteins (cd14667), RVT-UG10
MutT_pyrophosphohydrolase (cd03425), PLDc_N_DEXD_b2 (cd09204), SSL2 (COG1061), DUF3427 (pfam11907)