myRT

myRT report for GCA_008679615.1_ASM867961v1

Download annotations/find similar RTs

Seq: NAMU01000010.1 Firmicutes bacterium isolate LMAG:81 MEG_81_10, whole genome shotgun sequence (11253 bp)
Overview 1 RT 1: 2-1971 bp Neighborhood of RT #1 [2, 1971] RVT-GII RVT-GII Feature: gene Location: 2-505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86-305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86-305 bp Feature: gene Location: 541-1266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 850-1237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 850-1 237 bp Feature: gene Location: 1581-1718 bp Feature: gene Location: 1792-1971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NAMU01000008.1 Firmicutes bacterium isolate LMAG:81 MEG_81_8, whole genome shotgun sequence (51481 bp)
Overview 1 RT 1: 24670-28268 bp Neighborhood of RT #1 [24670, 28369] IS285 RVT-GII Acetyltransf_7 Feature: gene Location: 24670-25911 bp Feature: domain Description: IS285 Location: 24742-25903 bp Feature: domain Description: IS2 85 Location: 2 4742 -2 5903 bp Feature: gene Location: 25918-26079 bp Feature: gene Location: 26140-27435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26395-27085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6395-2 7085 bp Feature: gene Location: 27488-27733 bp Feature: gene Location: 27926-28369 bp Feature: domain Description: Acetyltransf_7 Location: 28025-28268 bp Feature: domain Description: Acetyltransf_7 Location: 2 802 5-2 82 68 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), RVT-GII, Acetyltransf_7 (pfam13508)

Seq: NAMU01000009.1 Firmicutes bacterium isolate LMAG:81 MEG_81_9, whole genome shotgun sequence (2976383 bp)
Overview 1 RT 1: 2167439-2182549 bp 2 RT 2: 2805398-2811035 bp Neighborhood of RT #1 [2167439, 2182908] ArdC YodL LPD16 NT_KNTase_like DUF4316 KOG1000 RVT-GII DUF3849 YtxK COG4646 Neighborhood of RT #2 [2805398, 2811250] DUF3848 DUF3849 KOG1000 RVT-GII COG4646 KOG0390 INT_ICEBs1_C_like Feature: gene Location: 2167439-2171470 bp Feature: domain Description: ArdC Location: 2167658-2168342 bp Feature: domain Description: ArdC Location: 2167658-21683 42 bp Feature: domain Description: YodL Location: 2169467-2169800 bp Feature: domain Description: YodL Location: 2169467-2169800 bp Feature: domain Description: LPD16 Location: 2169830-2170133 bp Feature: domain Description: LPD16 Location: 216983 0-217013 3 bp Feature: domain Description: NT_KNTase_like Location: 2170310-2170505 bp Feature: domain Description: NT_KNTase_like Location: 21703 10-2170505 bp Feature: domain Description: DUF4316 Location: 2171234-2171387 bp Feature: domain Description: DUF43 16 Location: 217123 4-21713 87 bp Feature: gene Location: 2171616-2172794 bp Feature: domain Description: KOG1000 Location: 2171628-2171838 bp Feature: domain Description: KOG1000 Location: 2171628-217183 8 bp Feature: gene Location: 2172932-2174845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2173250-2173976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2173 250-2173 976 bp Feature: gene Location: 2175009-2175155 bp Feature: gene Location: 2175532-2182908 bp Feature: domain Description: DUF3849 Location: 2177935-2178283 bp Feature: domain Description: DUF3 849 Location: 217793 5-2178283 bp Feature: domain Description: YtxK Location: 2179195-2179918 bp Feature: domain Description: YtxK Location: 2179195-2179918 bp Feature: domain Description: COG4646 Location: 2179990-2182549 bp Feature: domain Description: COG4646 Location: 2179990-2182549 bp Feature: gene Location: 2805398-2806216 bp Feature: domain Description: DUF3848 Location: 2805416-2805695 bp Feature: domain Description: DUF3 848 Location: 2805416-2805695 bp Feature: domain Description: DUF3849 Location: 2805731-2806094 bp Feature: domain Description: DUF3 849 Location: 280573 1-2806094 bp Feature: gene Location: 2806327-2807244 bp Feature: domain Description: KOG1000 Location: 2806351-2806552 bp Feature: domain Description: KOG1000 Location: 28063 51-2806552 bp Feature: gene Location: 2807389-2808360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2807395-2807503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28073 95-2807503 bp Feature: gene Location: 2808563-2808835 bp Feature: gene Location: 2808965-2811250 bp Feature: domain Description: COG4646 Location: 2808971-2809679 bp Feature: domain Description: COG4646 Location: 2808971-2809679 bp Feature: domain Description: KOG0390 Location: 2809955-2810210 bp Feature: domain Description: KOG03 90 Location: 2809955-2810210 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2810729-2811035 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2810729-281103 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), YodL (pfam14191), LPD16 (pfam18830), NT_KNTase_like (cd05403), DUF4316 (pfam14195), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, DUF3849 (pfam12960), YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class )
DUF3848 (pfam12959), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), INT_ICEBs1_C_like (cd01189)