myRT

myRT report for GCA_008680095.1_ASM868009v1

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Seq: NALV01000004.1 Faecalibacterium prausnitzii isolate LMAG:56 MEG_56_4, whole genome shotgun sequence (654986 bp)
Overview 1 RT 1: 22746-34876 bp Neighborhood of RT #1 [22746, 35337] MutS_I YtxK COG4646 RVT-GII HNHc COG4646 KOG0390 group_II_RT_mat Feature: gene Location: 22746-23138 bp Feature: gene Location: 23220-29153 bp Feature: domain Description: MutS_I Location: 25146-25389 bp Feature: domain Description: MutS_I Location: 251 46-25389 bp Feature: domain Description: YtxK Location: 26310-27075 bp Feature: domain Description: YtxK Location: 2631 0-27075 bp Feature: domain Description: COG4646 Location: 27120-29139 bp Feature: domain Description: COG4646 Location: 271 20-291 39 bp Feature: gene Location: 29853-31769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30177-30891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301 77-30891 bp Feature: domain Description: HNHc Note: nucleases Location: 31521-31692 bp Feature: domain Description: HNHc Note: nucleases Location: 31 521 -31 692 bp Feature: gene Location: 31997-33055 bp Feature: domain Description: COG4646 Location: 32000-32561 bp Feature: domain Description: COG4646 Location: 32000-32561 bp Feature: domain Description: KOG0390 Location: 32828-33041 bp Feature: domain Description: KOG0390 Location: 32828-33041 bp Feature: gene Location: 33646-35337 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 33826-34876 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 33826-34876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MutS_I (pfam01624), YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, HNHc (smart00507), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), group_II_RT_mat (TIGR04416)