myRT

myRT report for GCA_008680225.1_ASM868022v1

Download annotations/find similar RTs

Seq: NALQ01000016.1 Prevotella sp. LMAG:51 MEG_51_16, whole genome shotgun sequence (104697 bp)
Overview 1 RT 1: 42574-51282 bp Neighborhood of RT #1 [42574, 51317] AcrB RND_mfp RVT-GII GIIM tRNA_CCA_actino Feature: gene Location: 42574-45828 bp Feature: domain Description: AcrB Location: 42586-45694 bp Feature: domain Description: AcrB Location: 42586-45694 bp Feature: gene Location: 46025-47227 bp Feature: domain Description: RND_mfp Location: 46139-47129 bp Feature: domain Description: RND_mfp Location: 461 39-471 29 bp Feature: gene Location: 47939-49345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48281-48899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48281 -48899 bp Feature: domain Description: GIIM Note: maturase Location: 48953-49157 bp Feature: domain Description: GIIM Note: maturase Location: 48953-491 57 bp Feature: gene Location: 49679-49825 bp Feature: gene Location: 49893-51317 bp Feature: domain Description: tRNA_CCA_actino Location: 49914-51282 bp Feature: domain Description: tRNA_CCA_actino Location: 4991 4-51 282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrB (COG0841), RND_mfp (TIGR01730), RVT-GII, GIIM (pfam08388), tRNA_CCA_actino (TIGR02692)

Seq: NALQ01000018.1 Prevotella sp. LMAG:51 MEG_51_18, whole genome shotgun sequence (158337 bp)
Overview 1 RT 1: 146901-152804 bp Neighborhood of RT #1 [146901, 152821] RVT-GII GIIM SunT Feature: gene Location: 146901-147449 bp Feature: gene Location: 147612-147764 bp Feature: gene Location: 148284-149690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148626-149244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14862 6-1492 44 bp Feature: domain Description: GIIM Note: maturase Location: 149298-149508 bp Feature: domain Description: GIIM Note: maturase Location: 1492 98-149508 bp Feature: gene Location: 150137-150610 bp Feature: gene Location: 150623-152821 bp Feature: domain Description: SunT Location: 150641-152804 bp Feature: domain Description: SunT Location: 150641-152 804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), SunT (COG2274)

Seq: NALQ01000022.1 Prevotella sp. LMAG:51 MEG_51_22, whole genome shotgun sequence (277064 bp)
Overview 1 RT 1: 208610-215777 bp Neighborhood of RT #1 [208610, 215905] RVT-UG26 DZR SLR SLR SEL1 SLR SLR PRK09039 SLR Feature: gene Location: 208610-209101 bp Feature: gene Location: 209244-210071 bp Feature: gene Location: 210117-211340 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 210315-210936 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 2103 15-21093 6 bp Feature: gene Location: 211518-214238 bp Feature: domain Description: DZR Location: 211533-211671 bp Feature: domain Description: DZR Location: 21153 3 -211671 bp Feature: domain Description: SLR Location: 211821-212049 bp Feature: domain Description: SLR Location: 211821-212049 bp Feature: domain Description: SLR Location: 212067-212406 bp Feature: domain Description: SLR Location: 212067-212406 bp Feature: domain Description: SEL1 Location: 212415-212514 bp Feature: domain Description: SEL1 Location: 212415-212514 bp Feature: domain Description: SLR Location: 212565-212826 bp Feature: domain Description: SLR Location: 212565-212826 bp Feature: domain Description: SLR Location: 212916-213219 bp Feature: domain Description: SLR Location: 212916-213 219 bp Feature: gene Location: 214262-215905 bp Feature: domain Description: PRK09039 Location: 214616-215456 bp Feature: domain Description: PRK0903 9 Location: 214616-215456 bp Feature: domain Description: SLR Location: 215573-215777 bp Feature: domain Description: SLR Location: 215573 -215777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, DZR (pfam12773), SLR (sd00010), SEL1 (smart00671), PRK09039 (peptidoglycan -binding protein)

Seq: NALQ01000024.1 Prevotella sp. LMAG:51 MEG_51_24, whole genome shotgun sequence (19871 bp)
Overview 1 RT 1: 12135-19870 bp Neighborhood of RT #1 [12135, 19869] TroA_d FecCD RVT-GII GIIM fadh2 metH Feature: gene Location: 12135-13283 bp Feature: domain Description: TroA_d Location: 12432-12954 bp Feature: domain Description: TroA_d Location: 124 32-12954 bp Feature: gene Location: 13386-14402 bp Feature: domain Description: FecCD Location: 13437-14394 bp Feature: domain Description: FecCD Location: 134 37-14 394 bp Feature: gene Location: 14610-16016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14952-15570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 952-15570 bp Feature: domain Description: GIIM Note: maturase Location: 15624-15828 bp Feature: domain Description: GIIM Note: maturase Location: 15624 -15828 bp Feature: gene Location: 16916-17938 bp Feature: domain Description: fadh2 Location: 16991-17894 bp Feature: domain Description: fadh2 Location: 16991-17894 bp Feature: gene Location: 18037-19869 bp Feature: domain Description: metH Location: 18082-19870 bp Feature: domain Description: metH Location: 18082-19870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TroA_d (cd01141), FecCD (pfam01032), RVT-GII, GIIM (pfam08388), fadh2 (TIGR00676), metH (TIGR02082)

Seq: NALQ01000026.1 Prevotella sp. LMAG:51 MEG_51_26, whole genome shotgun sequence (371041 bp)
Overview 1 RT 1: 348441-352172 bp Neighborhood of RT #1 [348441, 352270] RVT-GII GIIM KOG1546 KOG1546 Feature: gene Location: 348441-348953 bp Feature: gene Location: 348965-349339 bp Feature: gene Location: 349820-350782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 350153-350771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 015 3-35 0771 bp Feature: gene Location: 350798-351217 bp Feature: domain Description: GIIM Note: maturase Location: 350825-351056 bp Feature: domain Description: GIIM Note: maturase Location: 35 0825 -35 105 6 bp Feature: gene Location: 351335-352270 bp Feature: domain Description: KOG1546 Location: 351422-351890 bp Feature: domain Description: KOG15 46 Location: 35 1422-35 1890 bp Feature: domain Description: KOG1546 Location: 351917-352172 bp Feature: domain Description: KOG15 46 Location: 35 1917-35 2172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG1546 (KOG1546, Metacaspase involved in regulation of apoptosis )

Seq: NALQ01000009.1 Prevotella sp. LMAG:51 MEG_51_9, whole genome shotgun sequence (110753 bp)
Overview 1 RT 1: 56540-63398 bp Neighborhood of RT #1 [56540, 63398] PRK15057 PRK15057 PRK15057 RVT-GII GIIM Feature: gene Location: 56540-57883 bp Feature: domain Description: PRK15057 Location: 56564-57056 bp Feature: domain Description: PRK15057 Location: 56 56 4-57056 bp Feature: domain Description: PRK15057 Location: 57068-57527 bp Feature: domain Description: PRK15057 Location: 5706 8-57527 bp Feature: domain Description: PRK15057 Location: 57605-57881 bp Feature: domain Description: PRK15057 Location: 576 05-57881 bp Feature: gene Location: 57917-58594 bp Feature: gene Location: 59416-60822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59758-60376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59758-6 0376 bp Feature: domain Description: GIIM Note: maturase Location: 60430-60634 bp Feature: domain Description: GIIM Note: maturase Location: 6 0430-6 06 34 bp Feature: gene Location: 61444-61581 bp Feature: gene Location: 62178-63398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15057 (UDP-glucose 6-dehydrogenase; Provisional), RVT-GII, GIIM (pfam08388)