myRT

myRT report for GCA_008680635.1_ASM868063v1

Download annotations/find similar RTs

Seq: NAKW01000002.1 Tyzzerella nexilis isolate LMAG:31 MEG_31_2, whole genome shotgun sequence (507582 bp)
Overview 1 RT 1: 156176-162846 bp 2 RT 2: 427596-432607 bp Neighborhood of RT #1 [156176, 163124] RVT-GII GIIM GH43_LbAraf43-like CBM35_Lmo2446-like CBM35_Lmo2446-like CBM35_Lmo2446-like CBM35_Lmo2446-like SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 Neighborhood of RT #2 [427596, 432810] truA YjiL RVT-Retrons PRK07726 Feature: gene Location: 156176-156322 bp Feature: gene Location: 156461-156607 bp Feature: gene Location: 156679-157983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156880-157498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 56880-1 57498 bp Feature: domain Description: GIIM Note: maturase Location: 157552-157768 bp Feature: domain Description: GIIM Note: maturase Location: 1 57552-1 57768 bp Feature: gene Location: 158238-160973 bp Feature: domain Description: GH43_LbAraf43-like Location: 158364-159246 bp Feature: domain Description: GH43_LbAraf43-like Location: 1 58364-1 59246 bp Feature: domain Description: CBM35_Lmo2446-like Location: 159393-159741 bp Feature: domain Description: CBM35_Lmo2446-like Location: 1 59393-1 59741 bp Feature: domain Description: CBM35_Lmo2446-like Location: 159777-160134 bp Feature: domain Description: CBM35_Lmo2446-like Location: 1 59777-1 601 34 bp Feature: domain Description: CBM35_Lmo2446-like Location: 160155-160383 bp Feature: domain Description: CBM35_Lmo2446-like Location: 1 601 55-1 60383 bp Feature: domain Description: CBM35_Lmo2446-like Location: 160416-160779 bp Feature: domain Description: CBM35_Lmo2446-like Location: 1 6041 6-1 60779 bp Feature: gene Location: 161241-163124 bp Feature: domain Description: SR_TndX_transposase Location: 161268-161682 bp Feature: domain Description: SR_TndX_transposase Location: 1 61 268-1 61 682 bp Feature: domain Description: Recombinase Location: 161781-162150 bp Feature: domain Description: Recombinase Location: 1 61 781 -1 621 50 bp Feature: domain Description: Zn_ribbon_recom Location: 162192-162375 bp Feature: domain Description: Zn_ribbon_recom Location: 1 621 92-1 62375 bp Feature: domain Description: DUF4368 Location: 162651-162846 bp Feature: domain Description: DUF4368 Location: 1 62651 -1 62846 bp Feature: gene Location: 427596-428333 bp Feature: domain Description: truA Location: 427599-428328 bp Feature: domain Description: truA Location: 427599-428328 bp Feature: gene Location: 428359-429117 bp Feature: domain Description: YjiL Location: 428365-429112 bp Feature: domain Description: YjiL Location: 428365-4291 1 2 bp Feature: gene Location: 429352-430353 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 429517-430072 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42951 7-430072 bp Feature: gene Location: 430350-430607 bp Feature: gene Location: 430630-432810 bp Feature: domain Description: PRK07726 Location: 430636-432607 bp Feature: domain Description: PRK07726 Location: 430636-432607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), GH43_LbAraf43-like (cd18820), CBM35_Lmo2446-like (cd04083), SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287), truA (PRK00021), YjiL (COG1924)
RVT-Retrons, PRK07726 (DNA topoisomerase 3)

Seq: NAKW01000003.1 Tyzzerella nexilis isolate LMAG:31 MEG_31_3, whole genome shotgun sequence (811490 bp)
Overview 1 RT 1: 194754-197812 bp Neighborhood of RT #1 [194754, 197812] TnpW AAA_25 RVT-GII Feature: gene Location: 194754-194942 bp Feature: domain Description: TnpW Location: 194781-194880 bp Feature: domain Description: TnpW Location: 194781-194880 bp Feature: gene Location: 195035-195286 bp Feature: domain Description: AAA_25 Location: 195077-195251 bp Feature: domain Description: AAA_2 5 Location: 195077-1952 51 bp Feature: gene Location: 195571-196866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195826-196516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19582 6-196516 bp Feature: gene Location: 197079-197261 bp Feature: gene Location: 197366-197812 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpW (pfam14202), AAA_25 (pfam13481), RVT-GII

Seq: NAKW01000004.1 Tyzzerella nexilis isolate LMAG:31 MEG_31_4, whole genome shotgun sequence (628711 bp)
Overview 1 RT 1: 30750-36210 bp Neighborhood of RT #1 [30750, 36329] RVT-GII RVT-GII DUF2207 Feature: gene Location: 30750-31220 bp Feature: gene Location: 31466-31615 bp Feature: gene Location: 31729-33024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31984-32674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 1984-3 2674 bp Feature: gene Location: 33223-33405 bp Feature: gene Location: 33618-34913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33873-34563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 873 -3 4563 bp Feature: gene Location: 35048-35791 bp Feature: gene Location: 35817-36329 bp Feature: domain Description: DUF2207 Location: 35862-36210 bp Feature: domain Description: DUF2207 Location: 3 5862-3 6210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF2207 (pfam09972)