myRT

myRT report for GCA_008680895.1_ASM868089v1

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Seq: NAKI01000005.1 Lachnospiraceae bacterium isolate LMAG:17 MEG_17_5, whole genome shotgun sequence (296725 bp)
Overview 1 RT 1: 292706-295802 bp Neighborhood of RT #1 [292706, 296551] DUF3801 VirD4 RVT-GII Feature: gene Location: 292706-293269 bp Feature: domain Description: DUF3801 Location: 292889-293249 bp Feature: domain Description: DUF3801 Location: 292889-293249 bp Feature: gene Location: 293266-294069 bp Feature: domain Description: VirD4 Location: 293491-294031 bp Feature: domain Description: VirD4 Location: 293491 -294031 bp Feature: gene Location: 294728-296551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 295058-295802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 295058-295802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT-GII

Seq: NAKI01000006.1 Lachnospiraceae bacterium isolate LMAG:17 MEG_17_6, whole genome shotgun sequence (304414 bp)
Overview 1 RT 1: 272283-277665 bp 2 RT 2: 299791-304411 bp Neighborhood of RT #1 [272283, 277665] PRK13351 PRK13351 RVT-GII Relaxase Neighborhood of RT #2 [299791, 304411] VirD4 RVT-GII VirD4 Feature: gene Location: 272283-274202 bp Feature: domain Description: PRK13351 Location: 272286-272751 bp Feature: domain Description: PRK13351 Location: 2 72 2 86-2 72 751 bp Feature: domain Description: PRK13351 Location: 272811-274131 bp Feature: domain Description: PRK13351 Location: 2 72 811-2 74131 bp Feature: gene Location: 274329-274496 bp Feature: gene Location: 275047-276690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275377-276121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 75377-2 7612 1 bp Feature: gene Location: 276793-277317 bp Feature: domain Description: Relaxase Location: 276823-277279 bp Feature: domain Description: Relaxase Location: 2 7682 3-2 772 79 bp Feature: gene Location: 277489-277665 bp Feature: gene Location: 299791-300777 bp Feature: domain Description: VirD4 Location: 299857-300655 bp Feature: domain Description: VirD4 Location: 2 99857-300655 bp Feature: gene Location: 300807-300989 bp Feature: gene Location: 300993-302900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301323-302067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30132 3-302 067 bp Feature: gene Location: 303612-304139 bp Feature: domain Description: VirD4 Location: 303654-304116 bp Feature: domain Description: VirD4 Location: 303654-304116 bp Feature: gene Location: 304148-304411 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13351 (elongation factor G-like protein), RVT-GII, Relaxase (pfam03432), VirD4 (COG3505)

Seq: NAKI01000008.1 Lachnospiraceae bacterium isolate LMAG:17 MEG_17_8, whole genome shotgun sequence (1206678 bp)
Overview 1 RT 1: 397460-400824 bp 2 RT 2: 446983-453195 bp Neighborhood of RT #1 [397460, 400865] RVT-GII GIIM NAD_synthase Neighborhood of RT #2 [446983, 453200] MacB_PCD SalY LolD RVT-GII AppF BaeS Feature: gene Location: 397460-398110 bp Feature: gene Location: 398141-398305 bp Feature: gene Location: 398609-399547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398612-398843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 98612-3 98843 bp Feature: domain Description: GIIM Note: maturase Location: 398915-399137 bp Feature: domain Description: GIIM Note: maturase Location: 3 98915-3 9913 7 bp Feature: gene Location: 399767-400015 bp Feature: gene Location: 400137-400865 bp Feature: domain Description: NAD_synthase Location: 400164-400824 bp Feature: domain Description: NAD_synthase Location: 400164-400824 bp Feature: gene Location: 446983-448704 bp Feature: domain Description: MacB_PCD Location: 447058-447568 bp Feature: domain Description: MacB_PCD Location: 447058-447568 bp Feature: domain Description: SalY Location: 447748-448150 bp Feature: domain Description: SalY Location: 447748-448150 bp Feature: gene Location: 448691-449236 bp Feature: domain Description: LolD Location: 448694-449210 bp Feature: domain Description: LolD Location: 448694-449210 bp Feature: gene Location: 449422-451329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449752-450496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449752-450496 bp Feature: gene Location: 451988-452137 bp Feature: domain Description: AppF Location: 451997-452090 bp Feature: domain Description: AppF Location: 451997-452090 bp Feature: gene Location: 452268-453200 bp Feature: domain Description: BaeS Location: 452514-453195 bp Feature: domain Description: BaeS Location: 452514-453 195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), NAD_synthase (pfam02540), MacB_PCD (pfam12704), SalY (COG0577), LolD (COG1136), AppF (COG4608), BaeS (COG0642)