myRT

myRT report for GCA_008680965.1_ASM868096v1

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Seq: NAKE01000001.1 Collinsella aerofaciens isolate LMAG:13 MEG_13_1, whole genome shotgun sequence (2371174 bp)
Overview 1 RT 1: 1436779-1441037 bp 2 RT 2: 1716822-1723265 bp 3 RT 3: 2203250-2207949 bp Neighborhood of RT #1 [1436779, 1441037] rve_2 RfbD RVT-UG2 Neighborhood of RT #2 [1716822, 1723265] Phage_Mu_F RVT-DGRs RVT-DGRs Neighborhood of RT #3 [2203250, 2207949] RVT-DGRs Feature: gene Location: 1436779-1437180 bp Feature: domain Description: rve_2 Location: 1437007-1437166 bp Feature: domain Description: rve_2 Location: 1 437007-1 4371 66 bp Feature: gene Location: 1437226-1437561 bp Feature: domain Description: RfbD Location: 1437244-1437490 bp Feature: domain Description: RfbD Location: 1 437244-1 437490 bp Feature: gene Location: 1438590-1439189 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1438791-1439130 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 438791 -1 4391 30 bp Feature: gene Location: 1439276-1439458 bp Feature: gene Location: 1439748-1441037 bp Feature: gene Location: 1716822-1718843 bp Feature: domain Description: Phage_Mu_F Location: 1717347-1717695 bp Feature: domain Description: Phage_Mu_F Location: 1 71 7347-1 71 7695 bp Feature: gene Location: 1719007-1719348 bp Feature: gene Location: 1719359-1719808 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1719434-1719605 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 71 9434-1 71 9605 bp Feature: gene Location: 1719805-1720389 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1720021-1720336 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 720021 -1 720336 bp Feature: gene Location: 1720737-1722362 bp Feature: gene Location: 1722363-1723265 bp Feature: gene Location: 2203250-2204152 bp Feature: gene Location: 2204165-2205640 bp Feature: gene Location: 2206005-2207207 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2206281-2206881 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2206281 -2206881 bp Feature: gene Location: 2207204-2207449 bp Feature: gene Location: 2207536-2207949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_2 (pfam13333), RfbD (COG1091), RVT-UG2, Phage_Mu_F (pfam04233), RVT-DGRs