myRT

myRT report for GCA_008680995.1_ASM868099v1

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Seq: NAKC01000002.1 Anaerostipes hadrus isolate LMAG:11 MEG_11_2, whole genome shotgun sequence (554818 bp)
Overview 1 RT 1: 115363-124197 bp Neighborhood of RT #1 [115363, 124241] carB AzgA RVT-GII GIIM SH3b PRK13914 Spr Spr Feature: gene Location: 115363-118596 bp Feature: domain Description: carB Location: 115366-118567 bp Feature: domain Description: carB Location: 1 1 5366-1 1 8567 bp Feature: gene Location: 119064-120428 bp Feature: domain Description: AzgA Location: 119067-120423 bp Feature: domain Description: AzgA Location: 1 1 9067-1 20423 bp Feature: gene Location: 120503-121894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120818-121442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2081 8-1 21 442 bp Feature: domain Description: GIIM Note: maturase Location: 121499-121709 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 499-1 21 709 bp Feature: gene Location: 122404-123339 bp Feature: domain Description: SH3b Location: 122530-122704 bp Feature: domain Description: SH3b Location: 1 22530-1 22704 bp Feature: domain Description: PRK13914 Location: 122755-122944 bp Feature: domain Description: PRK1 391 4 Location: 1 22755-1 22944 bp Feature: domain Description: Spr Location: 122977-123274 bp Feature: domain Description: Spr Location: 1 22977-1 23274 bp Feature: gene Location: 123534-124241 bp Feature: domain Description: Spr Location: 123792-124197 bp Feature: domain Description: Spr Location: 1 23792-1 241 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT carB (PRK12815), AzgA (COG2252), RVT-GII, GIIM (pfam08388), SH3b (smart00287), PRK13914 (invasion associated endopeptidase), Spr (COG0791)

Seq: NAKC01000003.1 Anaerostipes hadrus isolate LMAG:11 MEG_11_3, whole genome shotgun sequence (457040 bp)
Overview 1 RT 1: 34619-40174 bp Neighborhood of RT #1 [34619, 40374] AAA_21 AAA_21 RVT-GII GIIM SpoIIID MATE_yoeA_like Feature: gene Location: 34619-35155 bp Feature: gene Location: 35155-36540 bp Feature: domain Description: AAA_21 Location: 35287-35638 bp Feature: domain Description: AAA_2 1 Location: 352 87-35638 bp Feature: domain Description: AAA_21 Location: 36145-36340 bp Feature: domain Description: AAA_2 1 Location: 36145-36340 bp Feature: gene Location: 36728-38140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37079-37700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37079-37700 bp Feature: domain Description: GIIM Note: maturase Location: 37754-37979 bp Feature: domain Description: GIIM Note: maturase Location: 37754-37979 bp Feature: gene Location: 38587-39042 bp Feature: domain Description: SpoIIID Location: 38797-39037 bp Feature: domain Description: SpoIIID Location: 38797-39037 bp Feature: gene Location: 39064-40374 bp Feature: domain Description: MATE_yoeA_like Location: 39100-40174 bp Feature: domain Description: MATE_yoeA_like Location: 39100-40174 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-GII, GIIM (pfam08388), SpoIIID (pfam12116), MATE_yoeA_like (cd13138)

Seq: NAKC01000004.1 Anaerostipes hadrus isolate LMAG:11 MEG_11_4, whole genome shotgun sequence (833271 bp)
Overview 1 RT 1: 103938-111062 bp Neighborhood of RT #1 [103938, 111094] PRK10429 lacI PBP1_GalR RVT-GII GIIM FucI PRK11618 Feature: gene Location: 103938-105320 bp Feature: domain Description: PRK10429 Location: 103968-105303 bp Feature: domain Description: PRK10429 Location: 103 968-1053 03 bp Feature: gene Location: 105477-106514 bp Feature: domain Description: lacI Location: 105501-105642 bp Feature: domain Description: lacI Location: 105501-105642 bp Feature: domain Description: PBP1_GalR Location: 105681-106488 bp Feature: domain Description: PBP1_GalR Location: 105681-106488 bp Feature: gene Location: 106620-108011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106935-107559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10693 5-107559 bp Feature: domain Description: GIIM Note: maturase Location: 107616-107826 bp Feature: domain Description: GIIM Note: maturase Location: 107616-107826 bp Feature: gene Location: 108523-110037 bp Feature: domain Description: FucI Location: 108556-110026 bp Feature: domain Description: FucI Location: 108556-110026 bp Feature: gene Location: 110048-111094 bp Feature: domain Description: PRK11618 Location: 110102-111062 bp Feature: domain Description: PRK11618 Location: 110102-111062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10429 (melibiose:sodium transporter MelB), lacI (PRK09526), PBP1_GalR (cd01544), RVT-GII, GIIM (pfam08388), FucI (COG2407), PRK11618 (inner membrane ABC transporter permease protein YjfF; Provisional)