myRT

myRT report for GCA_008681005.1_ASM868100v1

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Seq: NAKF01000010.1 Blautia sp. LMAG:14 MEG_14_10, whole genome shotgun sequence (374988 bp)
Overview 1 RT 1: 354011-358705 bp 2 RT 2: 372143-374635 bp Neighborhood of RT #1 [354011, 358743] RVT-GII TetM_like MFS_YxiO_like Neighborhood of RT #2 [372143, 374985] YktD UbiE RVT-GII Feature: gene Location: 354011-354250 bp Feature: gene Location: 354254-354466 bp Feature: gene Location: 355170-357083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 355488-356214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 355488-35621 4 bp Feature: gene Location: 357200-357355 bp Feature: domain Description: TetM_like Location: 357227-357353 bp Feature: domain Description: TetM_like Location: 357227-357353 bp Feature: gene Location: 357442-358743 bp Feature: domain Description: MFS_YxiO_like Location: 357514-358705 bp Feature: domain Description: MFS_YxiO_like Location: 35751 4-358705 bp Feature: gene Location: 372143-373249 bp Feature: domain Description: YktD Location: 372416-373124 bp Feature: domain Description: YktD Location: 37241 6-3731 24 bp Feature: gene Location: 373342-373956 bp Feature: domain Description: UbiE Location: 373384-373849 bp Feature: domain Description: UbiE Location: 373384-373849 bp Feature: gene Location: 374167-374985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374173-374635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3741 73-374635 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TetM_like (cd04168), MFS_YxiO_like (cd17482), YktD (COG3315), UbiE (COG2226)

Seq: NAKF01000011.1 Blautia sp. LMAG:14 MEG_14_11, whole genome shotgun sequence (212491 bp)
Overview 1 RT 1: 3-4857 bp Neighborhood of RT #1 [3, 5000] TraC-F-type RVT-GII HNHc PrgI Feature: gene Location: 3-785 bp Feature: domain Description: TraC-F-type Location: 36-696 bp Feature: domain Description: TraC-F-type Location: 36-696 bp Feature: gene Location: 951-2924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1287-2025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 87-2 02 5 bp Feature: domain Description: HNHc Note: nucleases Location: 2580-2718 bp Feature: domain Description: HNHc Note: nucleases Location: 2 580-2 718 bp Feature: gene Location: 3647-4606 bp Feature: gene Location: 4566-5000 bp Feature: domain Description: PrgI Location: 4584-4857 bp Feature: domain Description: PrgI Location: 4584-4857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrgI (pfam12666), RVT-GII, HNHc (smart00507)

Seq: NAKF01000002.1 Blautia sp. LMAG:14 MEG_14_2, whole genome shotgun sequence (84452 bp)
Overview 1 RT 1: 81352-84100 bp Neighborhood of RT #1 [81352, 84450] DDE_Tnp_1 PRK10714 RVT-GII Feature: gene Location: 81352-82098 bp Feature: domain Description: DDE_Tnp_1 Location: 81391-81949 bp Feature: domain Description: DDE_Tnp_1 Location: 813 91-81949 bp Feature: gene Location: 82516-83004 bp Feature: domain Description: PRK10714 Location: 82540-82978 bp Feature: domain Description: PRK10714 Location: 82540-82978 bp Feature: gene Location: 83356-84450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83410-84100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 410-84100 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), PRK10714 (undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional), RVT-GII

Seq: NAKF01000005.1 Blautia sp. LMAG:14 MEG_14_5, whole genome shotgun sequence (162547 bp)
Overview 1 RT 1: 131866-136264 bp Neighborhood of RT #1 [131866, 136264] BaeS RVT-GII GIIM AAAA Feature: gene Location: 131866-132048 bp Feature: gene Location: 131854-133026 bp Feature: domain Description: BaeS Location: 132121-133018 bp Feature: domain Description: BaeS Location: 132121-133018 bp Feature: gene Location: 133549-134112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133555-133756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133555-133756 bp Feature: domain Description: GIIM Note: maturase Location: 133816-134041 bp Feature: domain Description: GIIM Note: maturase Location: 133816-134 04 1 bp Feature: gene Location: 134340-135737 bp Feature: domain Description: AAAA Location: 134349-135567 bp Feature: domain Description: AAAA Location: 134 34 9-135567 bp Feature: gene Location: 136130-136264 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), RVT-GII, GIIM (pfam08388), AAAA (COG1672)

Seq: NAKF01000007.1 Blautia sp. LMAG:14 MEG_14_7, whole genome shotgun sequence (476316 bp)
Overview 1 RT 1: 424827-430820 bp 2 RT 2: 440240-452366 bp Neighborhood of RT #1 [424827, 430822] PrgI RVT-GII HNHc TraC-F-type DUF3851 Neighborhood of RT #2 [440240, 452407] TTRAP YtxK COG4646 RVT-GII KOG1000 MobC Feature: gene Location: 424827-425282 bp Feature: domain Description: PrgI Location: 424842-425115 bp Feature: domain Description: PrgI Location: 424842-425 115 bp Feature: gene Location: 425239-426213 bp Feature: gene Location: 426936-428909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427272-428010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427272-428010 bp Feature: domain Description: HNHc Note: nucleases Location: 428565-428703 bp Feature: domain Description: HNHc Note: nucleases Location: 4285 65 -428703 bp Feature: gene Location: 429075-430442 bp Feature: domain Description: TraC-F-type Location: 429099-430242 bp Feature: domain Description: TraC-F-type Location: 429099-430242 bp Feature: gene Location: 430442-430822 bp Feature: domain Description: DUF3851 Location: 430448-430820 bp Feature: domain Description: DUF385 1 Location: 430448-430820 bp Feature: gene Location: 440240-440455 bp Feature: domain Description: TTRAP Location: 440252-440441 bp Feature: domain Description: TTRAP Location: 44025 2-440441 bp Feature: gene Location: 440534-448324 bp Feature: domain Description: YtxK Location: 444557-445232 bp Feature: domain Description: YtxK Location: 4445 5 7-445 232 bp Feature: domain Description: COG4646 Location: 445301-447881 bp Feature: domain Description: COG4646 Location: 445 301-447881 bp Feature: gene Location: 449011-450924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449329-450055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449329-45 005 5 bp Feature: gene Location: 451056-452078 bp Feature: domain Description: KOG1000 Location: 451065-451284 bp Feature: domain Description: KOG1000 Location: 45 1065 -45 1284 bp Feature: gene Location: 452075-452407 bp Feature: domain Description: MobC Location: 452255-452366 bp Feature: domain Description: MobC Location: 45 225 5 -45 2366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrgI (pfam12666), RVT-GII, HNHc (smart00507), TraC-F-type (TIGR02746), DUF3851 (pfam12962), TTRAP (pfam14203), YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), MobC (pfam05713)