myRT

myRT report for GCA_008681075.1_ASM868107v1

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Seq: NAJZ01000002.1 Bacteroides dorei isolate LMAG:8 MEG_8_2, whole genome shotgun sequence (366016 bp)
Overview 1 RT 1: 362308-365044 bp Neighborhood of RT #1 [362308, 365044] RVT-DGRs RVT-DGRs Feature: gene Location: 362308-362709 bp Feature: gene Location: 362776-363102 bp Feature: gene Location: 363114-363491 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 363126-363417 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3631 26-36341 7 bp Feature: gene Location: 363610-364074 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 363820-364024 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 363820-364024 bp Feature: gene Location: 364275-364439 bp Feature: gene Location: 364556-365044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: NAJZ01000003.1 Bacteroides dorei isolate LMAG:8 MEG_8_3, whole genome shotgun sequence (1531986 bp)
Overview 1 RT 1: 1274504-1277941 bp Neighborhood of RT #1 [1274504, 1277941] RVT-DGRs Feature: gene Location: 1274504-1274821 bp Feature: gene Location: 1274818-1275195 bp Feature: gene Location: 1275176-1276216 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1275383-1276085 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12 75383-12 76085 bp Feature: gene Location: 1276334-1276483 bp Feature: gene Location: 1276514-1277941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: NAJZ01000004.1 Bacteroides dorei isolate LMAG:8 MEG_8_4, whole genome shotgun sequence (1100769 bp)
Overview 1 RT 1: 924229-932487 bp Neighborhood of RT #1 [924229, 932870] RVT-GII YkfC RVT_N N6_Mtase COG4646 Feature: gene Location: 924229-924369 bp Feature: gene Location: 924574-925887 bp Feature: gene Location: 925841-927190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 925865-926513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 925865-926513 bp Feature: domain Description: YkfC Location: 926723-926813 bp Feature: domain Description: YkfC Location: 926723 -926813 bp Feature: gene Location: 927220-927576 bp Feature: RT Description: RVT_N Location: 927343-927508 bp Feature: RT Description: RVT_N Location: 9273 43 -927508 bp Feature: gene Location: 928182-932870 bp Feature: domain Description: N6_Mtase Location: 928494-929097 bp Feature: domain Description: N6_Mtase Location: 928494-929097 bp Feature: domain Description: COG4646 Location: 930426-932487 bp Feature: domain Description: COG4646 Location: 93 0426-93 2487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YkfC (COG3344), RVT_N (pfam13655), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: NAJZ01000006.1 Bacteroides dorei isolate LMAG:8 MEG_8_6, whole genome shotgun sequence (416753 bp)
Overview 1 RT 1: 393122-402525 bp Neighborhood of RT #1 [393122, 402525] RVT-DGRs Feature: gene Location: 393122-399637 bp Feature: gene Location: 399777-399941 bp Feature: gene Location: 400143-401444 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 400353-401031 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4 00353-4 01031 bp Feature: gene Location: 401446-401934 bp Feature: gene Location: 402217-402525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: NAJZ01000007.1 Bacteroides dorei isolate LMAG:8 MEG_8_7, whole genome shotgun sequence (420528 bp)
Overview 1 RT 1: 165611-172746 bp Neighborhood of RT #1 [165611, 172949] RVT_N RVT-GII GIIM TraG-D_C ABCF_EF-3 ABCF_EF-3 Feature: gene Location: 165611-165808 bp Feature: gene Location: 165878-166468 bp Feature: gene Location: 167105-168757 bp Feature: RT Description: RVT_N Location: 167159-167402 bp Feature: RT Description: RVT_N Location: 16715 9-167402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167447-168095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167447-168095 bp Feature: domain Description: GIIM Note: maturase Location: 168149-168380 bp Feature: domain Description: GIIM Note: maturase Location: 168149-168380 bp Feature: gene Location: 168762-169979 bp Feature: domain Description: TraG-D_C Location: 169344-169677 bp Feature: domain Description: TraG-D_C Location: 169344-169677 bp Feature: gene Location: 170055-172949 bp Feature: domain Description: ABCF_EF-3 Location: 171129-171192 bp Feature: domain Description: ABCF_EF-3 Location: 171129-171192 bp Feature: domain Description: ABCF_EF-3 Location: 172116-172746 bp Feature: domain Description: ABCF_EF-3 Location: 172116-172746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696), ABCF_EF-3 (cd03221)