myRT

myRT report for GCA_008682215.1_ASM868221v1

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Seq: QSMZ01000018.1 Bacillus cereus strain 111b scaffold18.1, whole genome shotgun sequence (102655 bp)
Overview 1 RT 1: 95126-98440 bp Neighborhood of RT #1 [95126, 98493] SH3b KOG4768 RVT-GII Intron_maturas2 LbH_gamma_CA Feature: gene Location: 95126-95320 bp Feature: domain Description: SH3b Location: 95201-95288 bp Feature: domain Description: SH3b Location: 95201 -95288 bp Feature: gene Location: 95776-96153 bp Feature: domain Description: KOG4768 Location: 95779-96148 bp Feature: domain Description: KOG4768 Location: 95779-961 48 bp Feature: gene Location: 96134-96841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96194-96479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 961 94-96479 bp Feature: domain Description: Intron_maturas2 Location: 96563-96824 bp Feature: domain Description: Intron_maturas2 Location: 96563-96824 bp Feature: gene Location: 96845-97198 bp Feature: gene Location: 97798-98493 bp Feature: domain Description: LbH_gamma_CA Location: 97921-98440 bp Feature: domain Description: LbH_gamma_CA Location: 97921 -98440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SH3b (smart00287), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, Intron_maturas2 (pfam01348), LbH_gamma_CA (cd00710)

Seq: QSMZ01000004.1 Bacillus cereus strain 111b scaffold4.1, whole genome shotgun sequence (300225 bp)
Overview 1 RT 1: 811-4459 bp Neighborhood of RT #1 [811, 4632] RVT-GII GIIM HNHc Sfp Feature: gene Location: 811-2700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1108-1846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1108-1846 bp Feature: domain Description: GIIM Note: maturase Location: 1933-2143 bp Feature: domain Description: GIIM Note: maturase Location: 1933-2 143 bp Feature: domain Description: HNHc Note: nucleases Location: 2455-2617 bp Feature: domain Description: HNHc Note: nucleases Location: 2 455-2 617 bp Feature: gene Location: 3316-3858 bp Feature: gene Location: 3883-4632 bp Feature: domain Description: Sfp Location: 3967-4459 bp Feature: domain Description: Sfp Location: 3967-4459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), Sfp (COG2091)

Seq: QSMZ01000045.1 Bacillus cereus strain 111b scaffold45.1, whole genome shotgun sequence (34173 bp)
Overview 1 RT 1: 27896-34171 bp Neighborhood of RT #1 [27896, 34171] ResIII RVT-GII Feature: gene Location: 27896-28462 bp Feature: gene Location: 28677-30392 bp Feature: domain Description: ResIII Location: 29487-29682 bp Feature: domain Description: ResIII Location: 29487-29682 bp Feature: gene Location: 31093-32160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31396-32098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 13 96-3 2098 bp Feature: gene Location: 32954-33925 bp Feature: gene Location: 33953-34171 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ResIII (pfam04851), RVT-GII

Seq: QSMZ01000047.1 Bacillus cereus strain 111b scaffold47.1, whole genome shotgun sequence (28659 bp)
Overview 1 RT 1: 3-1823 bp Neighborhood of RT #1 [3, 1823] RVT-GII GIIM Feature: gene Location: 3-683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-300 bp Feature: domain Description: GIIM Note: maturase Location: 375-600 bp Feature: domain Description: GIIM Note: maturase Location: 375-600 bp Feature: gene Location: 1188-1499 bp Feature: gene Location: 1611-1823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QSMZ01000054.1 Bacillus cereus strain 111b scaffold54.1, whole genome shotgun sequence (39321 bp)
Overview 1 RT 1: 20878-25932 bp Neighborhood of RT #1 [20878, 25932] SR_ResInv RVT-GII DDE_Tnp_1 Feature: gene Location: 20878-21135 bp Feature: domain Description: SR_ResInv Location: 20914-21085 bp Feature: domain Description: SR_ResInv Location: 20914-21085 bp Feature: gene Location: 21226-21444 bp Feature: gene Location: 21755-22933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22064-22703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22064-22703 bp Feature: gene Location: 23414-24484 bp Feature: domain Description: DDE_Tnp_1 Location: 23783-24470 bp Feature: domain Description: DDE_Tnp_1 Location: 23783-24470 bp Feature: gene Location: 25759-25932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_ResInv (cd03768), RVT-GII, DDE_Tnp_1 (pfam01609)

Seq: QSMZ01000006.1 Bacillus cereus strain 111b scaffold6.1, whole genome shotgun sequence (293680 bp)
Overview 1 RT 1: 181594-187374 bp 2 RT 2: 244104-247740 bp 3 RT 3: 287773-293547 bp Neighborhood of RT #1 [181594, 187374] DUF3854 LPD1 RVT-GII HNHc Neighborhood of RT #2 [244104, 247781] NT_KNTase_like RVT-GII HNHc HEPN Neighborhood of RT #3 [287773, 293567] RVT_N RVT-GII GIIM HNHc RVT-GII GIIM HNHc Feature: gene Location: 181594-182907 bp Feature: domain Description: DUF3854 Location: 182524-182875 bp Feature: domain Description: DUF3854 Location: 182524-182875 bp Feature: gene Location: 182897-183694 bp Feature: domain Description: LPD1 Location: 183443-183638 bp Feature: domain Description: LPD1 Location: 183443-1836 38 bp Feature: gene Location: 183766-185562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184060-184756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18406 0-184756 bp Feature: domain Description: HNHc Note: nucleases Location: 185356-185431 bp Feature: domain Description: HNHc Note: nucleases Location: 185356 -185431 bp Feature: gene Location: 185594-185905 bp Feature: gene Location: 186283-187374 bp Feature: gene Location: 244104-244502 bp Feature: domain Description: NT_KNTase_like Location: 244179-244479 bp Feature: domain Description: NT_KNTase_like Location: 244179-244479 bp Feature: gene Location: 245061-245264 bp Feature: gene Location: 245261-246292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245582-246287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245582-246 287 bp Feature: gene Location: 246428-247192 bp Feature: domain Description: HNHc Note: nucleases Location: 246914-247076 bp Feature: domain Description: HNHc Note: nucleases Location: 246 914-247076 bp Feature: gene Location: 247338-247781 bp Feature: domain Description: HEPN Location: 247392-247740 bp Feature: domain Description: HEPN Location: 247392-247740 bp Feature: gene Location: 287773-288021 bp Feature: gene Location: 288060-288290 bp Feature: gene Location: 288636-290444 bp Feature: domain Description: RVT_N Location: 288687-288927 bp Feature: domain Description: RVT_N Location: 2886 87-288927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288987-289641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288987-2896 41 bp Feature: domain Description: GIIM Note: maturase Location: 289704-289938 bp Feature: domain Description: GIIM Note: maturase Location: 289704-289938 bp Feature: domain Description: HNHc Note: nucleases Location: 290151-290298 bp Feature: domain Description: HNHc Note: nucleases Location: 290151-290298 bp Feature: gene Location: 290518-290751 bp Feature: gene Location: 291435-293567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291726-292815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291726 -292815 bp Feature: domain Description: GIIM Note: maturase Location: 292899-293127 bp Feature: domain Description: GIIM Note: maturase Location: 292899-293127 bp Feature: domain Description: HNHc Note: nucleases Location: 293391-293547 bp Feature: domain Description: HNHc Note: nucleases Location: 293391-293547 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3854 (pfam12965), LPD1 (pfam18796), RVT-GII, HNHc (smart00507), NT_KNTase_like (cd05403), HEPN (smart00748), RVT_N (pfam13655), GIIM (pfam08388)

Seq: QSMZ01000008.1 Bacillus cereus strain 111b scaffold8.1, whole genome shotgun sequence (230924 bp)
Overview 1 RT 1: 32-4076 bp Neighborhood of RT #1 [32, 4093] RVT-GII Intron_maturas2 HNHc KOG4768 UvrD Feature: gene Location: 32-349 bp Feature: gene Location: 584-2422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 848-1700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 848-17 00 bp Feature: domain Description: Intron_maturas2 Location: 1796-2132 bp Feature: domain Description: Intron_maturas2 Location: 17 96-2132 bp Feature: domain Description: HNHc Note: nucleases Location: 2240-2393 bp Feature: domain Description: HNHc Note: nucleases Location: 2240-2393 bp Feature: gene Location: 2568-2702 bp Feature: domain Description: KOG4768 Location: 2571-2697 bp Feature: domain Description: KOG47 68 Location: 257 1-2697 bp Feature: gene Location: 2840-4093 bp Feature: domain Description: UvrD Location: 2843-4076 bp Feature: domain Description: UvrD Location: 2843-407 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), UvrD (COG0210)

Seq: QSMZ01000086.1 Bacillus cereus strain 111b scaffold86.1, whole genome shotgun sequence (950 bp)
Overview 1 RT 1: 3-855 bp Neighborhood of RT #1 [3, 947] RVT-GII Feature: gene Location: 3-212 bp Feature: gene Location: 372-947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378 -8 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII