myRT

myRT report for GCA_008682415.1_ASM868241v1

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Seq: VANK01000001.1 Acidobacteria bacterium AB60 NODE_1_length_1345509_cov_41.8676_ID_577, whole genome shotgun sequence (1345509 bp)
Overview 1 RT 1: 1333631-1338418 bp Neighborhood of RT #1 [1333631, 1338501] PRK05479 RVT-Retrons MarR Feature: gene Location: 1333631-1334653 bp Feature: domain Description: PRK05479 Location: 1333634-1334615 bp Feature: domain Description: PRK05479 Location: 1 333634-1 33461 5 bp Feature: gene Location: 1335168-1335332 bp Feature: gene Location: 1335378-1337174 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1336293-1336947 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 336293-1 336947 bp Feature: gene Location: 1337411-1337581 bp Feature: gene Location: 1337935-1338501 bp Feature: domain Description: MarR Location: 1338070-1338418 bp Feature: domain Description: MarR Location: 1 338070-1 33841 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05479 (ketol-acid reductoisomerase; Provisional), RVT-Retrons, MarR (pfam01047)

Seq: VANK01000002.1 Acidobacteria bacterium AB60 NODE_2_length_684000_cov_39.7174_ID_1229, whole genome shotgun sequence (684000 bp)
Overview 1 RT 1: 307267-309400 bp Neighborhood of RT #1 [307267, 309513] HTH_Tnp_1 HTH_21 RVT-GII RVT-GII GIIM rve_3 Feature: gene Location: 307267-307485 bp Feature: domain Description: HTH_Tnp_1 Location: 307288-307423 bp Feature: domain Description: HTH_Tnp_1 Location: 3072 88-30742 3 bp Feature: gene Location: 307665-307802 bp Feature: domain Description: HTH_21 Location: 307671-307767 bp Feature: domain Description: HTH_2 1 Location: 307671-307767 bp Feature: gene Location: 307863-308357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307902-308328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307902 -30832 8 bp Feature: gene Location: 308366-308893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308372-308435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308372 -308435 bp Feature: domain Description: GIIM Note: maturase Location: 308513-308732 bp Feature: domain Description: GIIM Note: maturase Location: 308513-308732 bp Feature: gene Location: 308972-309265 bp Feature: gene Location: 309184-309513 bp Feature: domain Description: rve_3 Location: 309277-309400 bp Feature: domain Description: rve_3 Location: 3092 77-309400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), HTH_21 (pfam13276), RVT-GII, GIIM (pfam08388), rve_3 (pfam13683)