myRT

myRT report for GCA_008692535.1_ASM869253v1

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Seq: RPGH01000178.1 Candidatus Enterovibrio escacola isolate LMS8E flattened_line_1089, whole genome shotgun sequence (3994 bp)
Overview 1 RT 1: 216-3599 bp Neighborhood of RT #1 [216, 3628] RVT-UG3 PRK09375 Feature: gene Location: 216-1565 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 672-1146 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 672-1 1 46 bp Feature: gene Location: 2254-2436 bp Feature: gene Location: 2573-3628 bp Feature: domain Description: PRK09375 Location: 2615-3599 bp Feature: domain Description: PRK09375 Location: 261 5-3599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, PRK09375 (quinolinate synthase NadA)

Seq: RPGH01000128.1 Candidatus Enterovibrio escacola isolate LMS8E flattened_line_698, whole genome shotgun sequence (6676 bp)
Overview 1 RT 1: 2-5906 bp Neighborhood of RT #1 [2, 6049] N6_Mtase RMtype1_S_Eco933I-TRD2-CR2_like RMtype1_S_Eco933I-TRD2-CR2_like RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 2-853 bp Feature: domain Description: N6_Mtase Location: 20-728 bp Feature: domain Description: N6_Mtase Location: 2 0-72 8 bp Feature: gene Location: 1231-2550 bp Feature: domain Description: RMtype1_S_Eco933I-TRD2-CR2_like Location: 1423-1663 bp Feature: domain Description: RMtype1_S_Eco933I-TRD2 -CR2 _like Location: 142 3-1663 bp Feature: domain Description: RMtype1_S_Eco933I-TRD2-CR2_like Location: 1963-2515 bp Feature: domain Description: RMtype1_S_Eco933I-TRD2 -CR2 _like Location: 1963-2 515 bp Feature: gene Location: 2924-3856 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3026-3617 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 302 6-3617 bp Feature: gene Location: 3849-5447 bp Feature: domain Description: COG3950 Location: 4050-5199 bp Feature: domain Description: COG3950 Location: 4050-5199 bp Feature: gene Location: 5615-6049 bp Feature: domain Description: TIGR02646 Location: 5621-5906 bp Feature: domain Description: TIGR02 646 Location: 562 1-5906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), RMtype1_S_Eco933I-TRD2-CR2_like (cd17253), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)