myRT

myRT report for GCA_008694745.1_ASM869474v1

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Seq: VUAT01000502.1 Lactobacillus crispatus strain NCK1351 AB55.735600, whole genome shotgun sequence (4118 bp)
Overview 1 RT 1: 81-4110 bp Neighborhood of RT #1 [81, 4115] Glyco_hydro_8 Tra8 rve RVT-GII ribH Feature: gene Location: 81-1178 bp Feature: domain Description: Glyco_hydro_8 Location: 192-1170 bp Feature: domain Description: Glyco_hydro_8 Location: 1 92-1 1 70 bp Feature: gene Location: 1515-2477 bp Feature: domain Description: Tra8 Location: 1575-2040 bp Feature: domain Description: Tra8 Location: 1 575-2040 bp Feature: domain Description: rve Location: 2073-2337 bp Feature: domain Description: rve Location: 2073-2337 bp Feature: gene Location: 2837-3361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2870-3218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2870-321 8 bp Feature: gene Location: 3636-4115 bp Feature: domain Description: ribH Location: 3654-4110 bp Feature: domain Description: ribH Location: 3654-41 1 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_hydro_8 (pfam01270), Tra8 (COG2826), rve (pfam00665), RVT-GII, ribH (PRK00061)

Seq: VUAT01000454.1 Lactobacillus crispatus strain NCK1351 AB82.859688, whole genome shotgun sequence (4188 bp)
Overview 1 RT 1: 244-3477 bp Neighborhood of RT #1 [244, 3512] RVT-GII RVT-GII QdoI COG2461 Feature: gene Location: 244-543 bp Feature: gene Location: 603-761 bp Feature: gene Location: 804-1016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 807-1005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 807-1005 bp Feature: gene Location: 1126-1545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1327-1534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 7-1534 bp Feature: gene Location: 2159-2572 bp Feature: domain Description: QdoI Location: 2234-2543 bp Feature: domain Description: QdoI Location: 2 2 34-2 543 bp Feature: gene Location: 3087-3512 bp Feature: domain Description: COG2461 Location: 3096-3477 bp Feature: domain Description: COG2 461 Location: 3096-3477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, QdoI (COG1917), COG2461 (Uncharacterized conserved protein, DUF438 domain, may contain hemerythrin domain )