myRT

myRT report for GCA_008694755.1_ASM869475v1

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Seq: VUAV01000024.1 Lactobacillus crispatus strain NCK2488 NODE_24_length_31646_cov_142.136210, whole genome shotgun sequence (31646 bp)
Overview 1 RT 1: 26622-31465 bp Neighborhood of RT #1 [26622, 31465] HTH_LacI PBP1_Qymf_like RVT-GII GIIM SunT Feature: gene Location: 26622-27608 bp Feature: domain Description: HTH_LacI Location: 26643-26790 bp Feature: domain Description: HTH_LacI Location: 26643-26790 bp Feature: domain Description: PBP1_Qymf_like Location: 26808-27603 bp Feature: domain Description: PBP1 _Qymf_like Location: 26808-27603 bp Feature: gene Location: 27680-27967 bp Feature: gene Location: 27922-28977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28123-28741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281 23-28741 bp Feature: domain Description: GIIM Note: maturase Location: 28798-28930 bp Feature: domain Description: GIIM Note: maturase Location: 28798-28930 bp Feature: gene Location: 29584-31158 bp Feature: domain Description: SunT Location: 29632-31150 bp Feature: domain Description: SunT Location: 29632-31 1 50 bp Feature: gene Location: 31148-31465 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_LacI (cd01392), PBP1_Qymf_like, RVT-GII, GIIM (pfam08388), SunT (COG2274)

Seq: VUAV01000034.1 Lactobacillus crispatus strain NCK2488 NODE_34_length_23229_cov_115.214982, whole genome shotgun sequence (23229 bp)
Overview 1 RT 1: 1604-5897 bp Neighborhood of RT #1 [1604, 5953] DHDPS-like PurR RVT-GII GIIM DUF3100 Feature: gene Location: 1604-2563 bp Feature: domain Description: DHDPS-like Location: 1634-2516 bp Feature: domain Description: DHDPS-like Location: 1634-2 516 bp Feature: gene Location: 2577-3569 bp Feature: domain Description: PurR Location: 2583-3567 bp Feature: domain Description: PurR Location: 2 583-3567 bp Feature: gene Location: 4080-4511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4089-4281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4089-42 81 bp Feature: domain Description: GIIM Note: maturase Location: 4335-4506 bp Feature: domain Description: GIIM Note: maturase Location: 4335-4506 bp Feature: gene Location: 4651-5142 bp Feature: gene Location: 5135-5953 bp Feature: domain Description: DUF3100 Location: 5195-5897 bp Feature: domain Description: DUF3100 Location: 5195-5897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DHDPS-like (cd00408), PurR (COG1609), RVT-GII, GIIM (pfam08388), DUF3100 (pfam11299)

Seq: VUAV01000083.1 Lactobacillus crispatus strain NCK2488 NODE_83_length_6210_cov_99.553859, whole genome shotgun sequence (6210 bp)
Overview 1 RT 1: 2819-5257 bp Neighborhood of RT #1 [2819, 5283] PRK09311 ribH RVT-GII group_II_RT_mat Feature: gene Location: 2819-3997 bp Feature: domain Description: PRK09311 Location: 2828-3989 bp Feature: domain Description: PRK093 11 Location: 2828-3 989 bp Feature: gene Location: 4012-4476 bp Feature: domain Description: ribH Location: 4015-4471 bp Feature: domain Description: ribH Location: 4015-4471 bp Feature: gene Location: 4751-4975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4754-4832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4754-483 2 bp Feature: gene Location: 5101-5283 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5134-5257 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 513 4-5257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09311 (bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II), ribH (PRK00061), RVT-GII, group_II_RT_mat (TIGR04416)