myRT

myRT report for GCA_008704095.1_ASM870409v1

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Seq: VXJG01000001.1 Klebsiella pneumoniae strain KP0228 KP0228_1, whole genome shotgun sequence (2838434 bp)
Overview 1 RT 1: 815228-820109 bp 2 RT 2: 1266069-1269412 bp 3 RT 3: 1429447-1433616 bp Neighborhood of RT #1 [815228, 820114] YccC PRK10016 RVT-GII dacD Neighborhood of RT #2 [1266069, 1269417] Terminase_2 RVT-GII DinI Neighborhood of RT #3 [1429447, 1434470] RVT-GII Phage_GPA Feature: gene Location: 815228-816286 bp Feature: domain Description: YccC Location: 815234-816272 bp Feature: domain Description: YccC Location: 81 5234-81 6272 bp Feature: gene Location: 816385-816858 bp Feature: domain Description: PRK10016 Location: 816388-816847 bp Feature: domain Description: PRK1 001 6 Location: 81 6388-81 6847 bp Feature: gene Location: 816940-818427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 817345-818035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 7345-81 8035 bp Feature: gene Location: 818433-818600 bp Feature: gene Location: 818945-820114 bp Feature: domain Description: dacD Location: 818954-820109 bp Feature: domain Description: dacD Location: 81 8954-8201 09 bp Feature: gene Location: 1266069-1266653 bp Feature: domain Description: Terminase_2 Location: 1266114-1266579 bp Feature: domain Description: Terminase_2 Location: 1 2661 1 4-1 266579 bp Feature: gene Location: 1266731-1266988 bp Feature: gene Location: 1267389-1268876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1267794-1268484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 267794-1 268484 bp Feature: gene Location: 1268984-1269172 bp Feature: gene Location: 1269184-1269417 bp Feature: domain Description: DinI Location: 1269229-1269412 bp Feature: domain Description: DinI Location: 1 269229-1 26941 2 bp Feature: gene Location: 1429447-1429686 bp Feature: gene Location: 1429686-1430024 bp Feature: gene Location: 1430121-1431608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1430526-1431216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 430526-1 431 21 6 bp Feature: gene Location: 1431614-1431781 bp Feature: gene Location: 1432086-1434470 bp Feature: domain Description: Phage_GPA Location: 1432650-1433616 bp Feature: domain Description: Phage_GPA Location: 1 432650-1 43361 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), Terminase_2 (pfam03592), DinI (pfam06183), Phage_GPA (pfam05840)

Seq: VXJG01000002.1 Klebsiella pneumoniae strain KP0228 KP0228_2, whole genome shotgun sequence (746437 bp)
Overview 1 RT 1: 19909-22974 bp 2 RT 2: 180961-186838 bp 3 RT 3: 261559-268295 bp Neighborhood of RT #1 [19909, 24986] DUF1902 RVT-GII PHA02515 Neighborhood of RT #2 [180961, 186840] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #3 [261559, 268300] Laminin_G_3 RVT-GII PRK10597 Feature: gene Location: 19909-20166 bp Feature: domain Description: DUF1902 Location: 19951-20137 bp Feature: domain Description: DUF1902 Location: 19951-2 0137 bp Feature: gene Location: 20257-20679 bp Feature: gene Location: 20595-22079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20997-21687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0997-2 1687 bp Feature: gene Location: 22088-22255 bp Feature: gene Location: 22620-24986 bp Feature: domain Description: PHA02515 Location: 22632-22974 bp Feature: domain Description: PHA02 515 Location: 2 2 632 -2 2 974 bp Feature: gene Location: 180961-181677 bp Feature: domain Description: Rve Location: 180976-181621 bp Feature: domain Description: Rve Location: 180976-18162 1 bp Feature: gene Location: 181683-182192 bp Feature: domain Description: PinE Location: 181731-182184 bp Feature: domain Description: PinE Location: 181731-182 184 bp Feature: gene Location: 183587-185074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183992-184682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183992 -184682 bp Feature: gene Location: 185154-185573 bp Feature: domain Description: PRK10276 Location: 185157-185568 bp Feature: domain Description: PRK102 76 Location: 185157-185568 bp Feature: gene Location: 185575-186840 bp Feature: domain Description: umuC Location: 185578-186838 bp Feature: domain Description: umuC Location: 185578-186838 bp Feature: gene Location: 261559-264582 bp Feature: gene Location: 264593-265324 bp Feature: domain Description: Laminin_G_3 Location: 264929-265268 bp Feature: domain Description: Laminin_G_3 Location: 2 6492 9-2 652 68 bp Feature: gene Location: 265980-267467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266385-267075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 66385-2 67075 bp Feature: gene Location: 267527-267736 bp Feature: gene Location: 268052-268300 bp Feature: domain Description: PRK10597 Location: 268055-268295 bp Feature: domain Description: PRK10597 Location: 2 68055-2 682 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1902 (pfam08972), RVT-GII, PHA02515 (hypothetical protein; Provisional), Rve (COG3316), PinE (COG1961), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Laminin_G_3 (pfam13385), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: VXJG01000003.1 Klebsiella pneumoniae strain KP0228 KP0228_3, whole genome shotgun sequence (740015 bp)
Overview 1 RT 1: 2-3739 bp 2 RT 2: 369786-373035 bp 3 RT 3: 377307-383066 bp 4 RT 4: 715507-719615 bp Neighborhood of RT #1 [2, 3840] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [369786, 373427] YbjK int RVT-GII Neighborhood of RT #3 [377307, 383071] dam Phage_GPA RVT-GII DinI Neighborhood of RT #4 [715507, 719617] DinI RVT-GII PRK10276 umuC Feature: gene Location: 2-328 bp Feature: gene Location: 332-1063 bp Feature: domain Description: Laminin_G_3 Location: 653-1007 bp Feature: domain Description: Laminin_G_3 Location: 653 -1007 bp Feature: gene Location: 1719-3206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2124-2814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2124-2814 bp Feature: gene Location: 3296-3475 bp Feature: gene Location: 3523-3840 bp Feature: domain Description: PRK10276 Location: 3529-3643 bp Feature: domain Description: PRK10276 Location: 3 529-3 643 bp Feature: domain Description: PRK10276 Location: 3670-3739 bp Feature: domain Description: PRK10276 Location: 3 670-3 73 9 bp Feature: gene Location: 369786-370349 bp Feature: domain Description: YbjK Location: 369792-370329 bp Feature: domain Description: YbjK Location: 3 69792-3 703 29 bp Feature: gene Location: 370472-371524 bp Feature: domain Description: int Location: 370475-371474 bp Feature: domain Description: int Location: 3 70475-3 71474 bp Feature: gene Location: 371940-373427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372345-373035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 723 45-3 73 03 5 bp Feature: gene Location: 377307-378164 bp Feature: domain Description: dam Location: 377310-378087 bp Feature: domain Description: dam Location: 3 773 10-3 78087 bp Feature: gene Location: 378161-380575 bp Feature: domain Description: Phage_GPA Location: 378725-379691 bp Feature: domain Description: Phage_GPA Location: 3 78725-3 79691 bp Feature: gene Location: 381051-382538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381456-382146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 81456-3 82146 bp Feature: gene Location: 382639-382827 bp Feature: gene Location: 382838-383071 bp Feature: domain Description: DinI Location: 382880-383066 bp Feature: domain Description: DinI Location: 3 82880-3 83 066 bp Feature: gene Location: 715507-715749 bp Feature: domain Description: DinI Location: 715558-715738 bp Feature: domain Description: DinI Location: 715558-71573 8 bp Feature: gene Location: 715764-715910 bp Feature: gene Location: 716364-717851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 716769-717459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 716769-717459 bp Feature: gene Location: 717930-718349 bp Feature: domain Description: PRK10276 Location: 717933-718344 bp Feature: domain Description: PRK10276 Location: 71793 3 -7183 44 bp Feature: gene Location: 718352-719617 bp Feature: domain Description: umuC Location: 718355-719615 bp Feature: domain Description: umuC Location: 7183 55-719615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Laminin_G_3 (pfam13385), YbjK (COG3226), int (PHA02601), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: VXJG01000006.1 Klebsiella pneumoniae strain KP0228 KP0228_6, whole genome shotgun sequence (203663 bp)
Overview 1 RT 1: 179462-182710 bp Neighborhood of RT #1 [179462, 182724] RVT-GII PRK10276 Feature: gene Location: 179462-179683 bp Feature: gene Location: 179945-180175 bp Feature: gene Location: 180409-181896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180814-181504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180814 -181504 bp Feature: gene Location: 181902-182069 bp Feature: gene Location: 182299-182724 bp Feature: domain Description: PRK10276 Location: 182302-182710 bp Feature: domain Description: PRK10276 Location: 182302-182710 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: VXJG01000008.1 Klebsiella pneumoniae strain KP0228 KP0228_8, whole genome shotgun sequence (53449 bp)
Overview 1 RT 1: 34307-38197 bp Neighborhood of RT #1 [34307, 38199] Sigma70_r4 PHA02517 RVT-GII GIIM PHA02517 PRK11352 Feature: gene Location: 34307-34588 bp Feature: domain Description: Sigma70_r4 Location: 34439-34535 bp Feature: domain Description: Sigma70_r4 Location: 34439-345 35 bp Feature: gene Location: 34677-35012 bp Feature: domain Description: PHA02517 Location: 34680-34989 bp Feature: domain Description: PHA025 17 Location: 34680-34989 bp Feature: gene Location: 35135-36658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35408-36140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 408-36140 bp Feature: domain Description: GIIM Note: maturase Location: 36254-36413 bp Feature: domain Description: GIIM Note: maturase Location: 3625 4-36413 bp Feature: gene Location: 37250-37675 bp Feature: domain Description: PHA02517 Location: 37271-37610 bp Feature: domain Description: PHA025 17 Location: 37271-37610 bp Feature: gene Location: 37891-38199 bp Feature: domain Description: PRK11352 Location: 38056-38197 bp Feature: domain Description: PRK1135 2 Location: 3805 6-38197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sigma70_r4 (pfam04545), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK11352 (formaldehyde-responsive transcriptional repressor FrmR)