myRT

myRT report for GCA_008704215.1_ASM870421v1

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Seq: VXJB01000002.1 Klebsiella pneumoniae strain Kp8 Contig_2, whole genome shotgun sequence (352735 bp)
Overview 1 RT 1: 198803-204040 bp Neighborhood of RT #1 [198803, 204042] DinI zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT-GII PRK10276 umuC Feature: gene Location: 198803-199045 bp Feature: domain Description: DinI Location: 198854-199034 bp Feature: domain Description: DinI Location: 1 98854-1 99034 bp Feature: gene Location: 199125-200345 bp Feature: domain Description: zf-ISL3 Location: 199257-199383 bp Feature: domain Description: zf-ISL3 Location: 1 99257-1 99383 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 199401-199548 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 1 99401 -1 99548 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 199599-200304 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1 99599-200304 bp Feature: gene Location: 200789-202276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201194-201884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 1 94-201 884 bp Feature: gene Location: 202355-202774 bp Feature: domain Description: PRK10276 Location: 202358-202769 bp Feature: domain Description: PRK1 0276 Location: 202358-202769 bp Feature: gene Location: 202777-204042 bp Feature: domain Description: umuC Location: 202780-204040 bp Feature: domain Description: umuC Location: 202780-204040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: VXJB01000005.1 Klebsiella pneumoniae strain Kp8 Contig_5, whole genome shotgun sequence (3838302 bp)
Overview 1 RT 1: 123052-127077 bp 2 RT 2: 3274625-3278982 bp 3 RT 3: 3307814-3311542 bp Neighborhood of RT #1 [123052, 127961] DinI RVT-GII Phage_GPA Neighborhood of RT #2 [3274625, 3278990] DUF551 RVT-GII PRK10597 DUF1367 Neighborhood of RT #3 [3307814, 3311739] RVT-GII PRK10276 Feature: gene Location: 123052-123285 bp Feature: domain Description: DinI Location: 123094-123280 bp Feature: domain Description: DinI Location: 12 3094-12 32 80 bp Feature: gene Location: 123296-123484 bp Feature: gene Location: 123585-125069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123987-124677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 3987-12 4677 bp Feature: gene Location: 125226-125459 bp Feature: gene Location: 125547-127961 bp Feature: domain Description: Phage_GPA Location: 126111-127077 bp Feature: domain Description: Phage_GPA Location: 12 6111-12 7077 bp Feature: gene Location: 3274625-3275101 bp Feature: domain Description: DUF551 Location: 3274886-3275084 bp Feature: domain Description: DUF551 Location: 32 74886-32 75084 bp Feature: gene Location: 3275260-3275487 bp Feature: gene Location: 3276206-3277693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3276611-3277301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 76611-32 77301 bp Feature: gene Location: 3277772-3278005 bp Feature: domain Description: PRK10597 Location: 3277775-3278000 bp Feature: domain Description: PRK10597 Location: 32 77775-32 78000 bp Feature: gene Location: 3278394-3278990 bp Feature: domain Description: DUF1367 Location: 3278397-3278982 bp Feature: domain Description: DUF1367 Location: 32 78397-32 78982 bp Feature: gene Location: 3307814-3307945 bp Feature: gene Location: 3309329-3309562 bp Feature: gene Location: 3309616-3311100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3310018-3310708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3310018-3310708 bp Feature: gene Location: 3311177-3311416 bp Feature: gene Location: 3311419-3311739 bp Feature: domain Description: PRK10276 Location: 3311425-3311542 bp Feature: domain Description: PRK102 76 Location: 331142 5-3311542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, Phage_GPA (pfam05840), DUF551 (pfam04448), PRK10597 (DNA damage-inducible protein I; Provisional), DUF1367 (pfam07105), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: VXJB01000006.1 Klebsiella pneumoniae strain Kp8 Contig_6, whole genome shotgun sequence (194548 bp)
Overview 1 RT 1: 10712-14733 bp Neighborhood of RT #1 [10712, 14733] zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT-GII Feature: gene Location: 10712-11932 bp Feature: domain Description: zf-ISL3 Location: 10844-10970 bp Feature: domain Description: zf-ISL3 Location: 10844-10970 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 10988-11135 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 10988-1113 5 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 11186-11891 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 11186-11891 bp Feature: gene Location: 12092-12325 bp Feature: gene Location: 12376-13887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12781-13495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12781-13 495 bp Feature: gene Location: 14121-14351 bp Feature: gene Location: 14410-14733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), RVT-GII