myRT

myRT report for GCA_008710145.1_ASM871014v1

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Seq: VYKL01000019.1 Bacillus endozanthoxylicus strain MER_TA_151 MER-TA-151_1_(paired)_trimmed_(paired)_contig_19, whole genome shotgun sequence (146989 bp)
Overview 1 RT 1: 33199-40052 bp Neighborhood of RT #1 [33199, 40052] RVT-CRISPR-like UvrD UvrD UvrD TPR SLR Feature: gene Location: 33199-33495 bp Feature: gene Location: 33711-34151 bp Feature: gene Location: 34954-36375 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 35200-35884 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 35200-35884 bp Feature: gene Location: 36492-39617 bp Feature: domain Description: UvrD Location: 37017-37113 bp Feature: domain Description: UvrD Location: 3701 7-371 1 3 bp Feature: domain Description: UvrD Location: 37413-37869 bp Feature: domain Description: UvrD Location: 3741 3-37869 bp Feature: domain Description: UvrD Location: 38097-38349 bp Feature: domain Description: UvrD Location: 38097-38349 bp Feature: domain Description: TPR Location: 38439-38841 bp Feature: domain Description: TPR Location: 38439-38841 bp Feature: domain Description: SLR Location: 39204-39525 bp Feature: domain Description: SLR Location: 39204-39525 bp Feature: gene Location: 39903-40052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, UvrD (COG0210), TPR (smart00028), SLR (sd00010)

Seq: VYKL01000068.1 Bacillus endozanthoxylicus strain MER_TA_151 MER-TA-151_1_(paired)_trimmed_(paired)_contig_68, whole genome shotgun sequence (2633 bp)
Overview 1 RT 1: 299-2417 bp Neighborhood of RT #1 [299, 2530] RVT-GII HNHc Feature: gene Location: 299-520 bp Feature: gene Location: 731-2530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1025-1721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 5-172 1 bp Feature: domain Description: HNHc Note: nucleases Location: 2258-2417 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 58-2 417 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: VYKL01000081.1 Bacillus endozanthoxylicus strain MER_TA_151 MER-TA-151_1_(paired)_trimmed_(paired)_contig_81, whole genome shotgun sequence (2532 bp)
Overview 1 RT 1: 106-2530 bp Neighborhood of RT #1 [106, 2530] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 106-1965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370-1231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 70-123 1 bp Feature: domain Description: Intron_maturas2 Location: 1318-1648 bp Feature: domain Description: Intron_maturas2 Location: 13 18-1648 bp Feature: domain Description: HNHc Note: nucleases Location: 1762-1936 bp Feature: domain Description: HNHc Note: nucleases Location: 1762-193 6 bp Feature: gene Location: 2381-2530 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)