myRT

myRT report for GCA_008711255.1_ASM871125v1

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Seq: VXJL01000066.1 Bacillus sp. BNPI-2 NODE_122_length_5022_cov_32.230186, whole genome shotgun sequence (5068 bp)
Overview 1 RT 1: 74-3515 bp Neighborhood of RT #1 [74, 3515] RVT-GII MTS Feature: gene Location: 74-2005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 395-1130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 395-1 1 30 bp Feature: gene Location: 2151-3272 bp Feature: domain Description: MTS Location: 2247-2610 bp Feature: domain Description: MTS Location: 2247-261 0 bp Feature: gene Location: 3288-3515 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MTS (pfam05175), RVT-GII

Seq: VXJL01000104.1 Bacillus sp. BNPI-2 NODE_247_length_3817_cov_32.394287, whole genome shotgun sequence (3863 bp)
Overview 1 RT 1: 2-2615 bp Neighborhood of RT #1 [2, 2615] RVT-GII Intron_maturas2 E1_enzyme_family Feature: gene Location: 2-1450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332-1169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332 -1169 bp Feature: domain Description: Intron_maturas2 Location: 1307-1448 bp Feature: domain Description: Intron_maturas2 Location: 1307-1448 bp Feature: gene Location: 2019-2201 bp Feature: domain Description: E1_enzyme_family Location: 2067-2187 bp Feature: domain Description: E1_enzyme_family Location: 2 067-2 187 bp Feature: gene Location: 2214-2615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT E1_enzyme_family (cl22428), RVT-GII, Intron_maturas2 (pfam01348)

Seq: VXJL01000141.1 Bacillus sp. BNPI-2 NODE_488_length_1289_cov_32.162918, whole genome shotgun sequence (1335 bp)
Overview 1 RT 1: 2-1058 bp Neighborhood of RT #1 [2, 1264] RVT-GII Feature: gene Location: 2-1264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 323-1058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 23 -1058 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VXJL01000034.1 Bacillus sp. BNPI-2 NODE_48_length_64227_cov_58.103275, whole genome shotgun sequence (64273 bp)
Overview 1 RT 1: 17046-21334 bp Neighborhood of RT #1 [17046, 21334] RVT_N RVT-GII GIIM RimL Feature: gene Location: 17046-17369 bp Feature: gene Location: 17419-17697 bp Feature: gene Location: 17915-19561 bp Feature: RT Description: RVT_N Location: 17957-18194 bp Feature: RT Description: RVT_N Location: 17957-18194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18248-18908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1824 8-18908 bp Feature: domain Description: GIIM Note: maturase Location: 18977-19208 bp Feature: domain Description: GIIM Note: maturase Location: 18977-19208 bp Feature: gene Location: 20200-20745 bp Feature: domain Description: RimL Location: 20218-20731 bp Feature: domain Description: RimL Location: 20218-20731 bp Feature: gene Location: 21200-21334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), RimL (COG1670)

Seq: VXJL01000007.1 Bacillus sp. BNPI-2 NODE_7_length_698727_cov_62.297756, whole genome shotgun sequence (698773 bp)
Overview 1 RT 1: 237413-241488 bp Neighborhood of RT #1 [237413, 241502] YugN amiF RVT-GII HNHc amiF Feature: gene Location: 237413-237778 bp Feature: domain Description: YugN Location: 237431-237692 bp Feature: domain Description: YugN Location: 237431-237692 bp Feature: gene Location: 237825-238448 bp Feature: domain Description: amiF Location: 237828-238443 bp Feature: domain Description: amiF Location: 237828-238443 bp Feature: gene Location: 238565-240397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238865-239570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238865 -2395 70 bp Feature: domain Description: HNHc Note: nucleases Location: 240149-240281 bp Feature: domain Description: HNHc Note: nucleases Location: 240149-240281 bp Feature: gene Location: 240790-240966 bp Feature: gene Location: 241113-241502 bp Feature: domain Description: amiF Location: 241116-241488 bp Feature: domain Description: amiF Location: 241116-241488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YugN (pfam08868), amiF (PRK13287), RVT-GII, HNHc (smart00507)