myRT

myRT report for GCA_008728055.1_ASM872805v1

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Seq: VYYW01000177.1 Escherichia coli strain UMB7764 NODE_177_length_2310_cov_141.112231, whole genome shotgun sequence (2310 bp)
Overview 1 RT 1: 16-1959 bp Neighborhood of RT #1 [16, 2204] RVT-GII GIIM Feature: gene Location: 16-387 bp Feature: gene Location: 681-2204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954-1686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954-1 686 bp Feature: domain Description: GIIM Note: maturase Location: 1761-1959 bp Feature: domain Description: GIIM Note: maturase Location: 1 761 -1 959 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VYYW01000049.1 Escherichia coli strain UMB7764 NODE_49_length_32963_cov_12.364843, whole genome shotgun sequence (32963 bp)
Overview 1 RT 1: 5252-8317 bp Neighborhood of RT #1 [5252, 8317] RVT-GII GIIM RVT-GII Feature: gene Location: 5252-5422 bp Feature: gene Location: 5560-5739 bp Feature: gene Location: 5838-6359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5844-6126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5844-612 6 bp Feature: domain Description: GIIM Note: maturase Location: 6174-6354 bp Feature: domain Description: GIIM Note: maturase Location: 6174-6354 bp Feature: gene Location: 6387-6926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6717-6795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6717-6795 bp Feature: gene Location: 6957-7154 bp Feature: gene Location: 7412-8317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VYYW01000052.1 Escherichia coli strain UMB7764 NODE_52_length_30025_cov_12.138705, whole genome shotgun sequence (30025 bp)
Overview 1 RT 1: 22258-28501 bp Neighborhood of RT #1 [22258, 28638] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22258-22524 bp Feature: domain Description: Phage_integrase Location: 22324-22420 bp Feature: domain Description: Phage_integrase Location: 223 24-22420 bp Feature: gene Location: 22607-23077 bp Feature: gene Location: 23424-26633 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23952-24441 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23 952-24441 bp Feature: domain Description: nitrilase Location: 25947-26544 bp Feature: domain Description: nitrilase Location: 25947-26544 bp Feature: gene Location: 26928-27731 bp Feature: domain Description: AbiEi_3_N Location: 26961-27222 bp Feature: domain Description: AbiEi_3 _N Location: 26961-27222 bp Feature: domain Description: AbiEi_3 Location: 27234-27690 bp Feature: domain Description: AbiEi_3 Location: 2723 4-27690 bp Feature: gene Location: 27718-28638 bp Feature: domain Description: AbiEii Location: 27760-28501 bp Feature: domain Description: AbiEii Location: 27760-28501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)