myRT

myRT report for GCA_008728555.2_ASM872855v2

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Seq: JAAMPN010000042.1 Bacillus megaterium strain IN_866 tig00000006_np1212, whole genome shotgun sequence (151839 bp)
Overview 1 RT 1: 12145-15652 bp 2 RT 2: 122976-128224 bp Neighborhood of RT #1 [12145, 15705] RVT_N RVT-GII GIIM MEDS Neighborhood of RT #2 [122976, 128224] RVT_N RVT-GII RVT-GII GIIM MEDS Feature: gene Location: 12145-12291 bp Feature: gene Location: 13003-13458 bp Feature: RT Description: RVT_N Location: 13087-13333 bp Feature: RT Description: RVT_N Location: 1 3087-1 3333 bp Feature: gene Location: 13589-14686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13595-14045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3595-1 4045 bp Feature: domain Description: GIIM Note: maturase Location: 14111-14345 bp Feature: domain Description: GIIM Note: maturase Location: 1 41 1 1 -1 4345 bp Feature: gene Location: 15141-15407 bp Feature: gene Location: 15472-15705 bp Feature: domain Description: MEDS Location: 15520-15652 bp Feature: domain Description: MEDS Location: 1 5520-1 5652 bp Feature: gene Location: 122976-123758 bp Feature: gene Location: 124228-124374 bp Feature: gene Location: 125086-125865 bp Feature: RT Description: RVT_N Location: 125170-125416 bp Feature: RT Description: RVT_N Location: 1 251 70-1 2541 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125470-125842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 25470-1 25842 bp Feature: gene Location: 125882-126772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125951-126131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 25951 -1 261 31 bp Feature: domain Description: GIIM Note: maturase Location: 126197-126431 bp Feature: domain Description: GIIM Note: maturase Location: 1 261 97-1 26431 bp Feature: gene Location: 127229-127792 bp Feature: domain Description: MEDS Location: 127277-127736 bp Feature: domain Description: MEDS Location: 1 27277-1 27736 bp Feature: gene Location: 128081-128224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), MEDS (pfam14417)

Seq: JAAMPN010000045.1 Bacillus megaterium strain IN_866 tig00000004_np1212, whole genome shotgun sequence (237166 bp)
Overview 1 RT 1: 68710-76071 bp 2 RT 2: 142738-148421 bp Neighborhood of RT #1 [68710, 76091] THN_reductase-like_SDR_c YeiB RVT_N RVT-GII GIIM ARO8 azlC Neighborhood of RT #2 [142738, 148447] PRK06126 PRK06126 RVT_N RVT-GII GIIM MdaB HxlR Feature: gene Location: 68710-69465 bp Feature: domain Description: THN_reductase-like_SDR_c Location: 68719-69457 bp Feature: domain Description: THN_reductase-like_SDR_c Location: 68719-69457 bp Feature: gene Location: 69718-70950 bp Feature: domain Description: YeiB Location: 69757-70945 bp Feature: domain Description: YeiB Location: 69757-70945 bp Feature: gene Location: 71812-73497 bp Feature: RT Description: RVT_N Location: 71896-72142 bp Feature: RT Description: RVT_N Location: 71896-72 142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72196-72856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 196-72 856 bp Feature: domain Description: GIIM Note: maturase Location: 72922-73156 bp Feature: domain Description: GIIM Note: maturase Location: 72 92 2 -73156 bp Feature: gene Location: 73724-75112 bp Feature: domain Description: ARO8 Location: 73793-75104 bp Feature: domain Description: ARO8 Location: 73793-75104 bp Feature: gene Location: 75381-76091 bp Feature: domain Description: azlC Location: 75411-76071 bp Feature: domain Description: azlC Location: 75411-76071 bp Feature: gene Location: 142738-144387 bp Feature: domain Description: PRK06126 Location: 142777-143902 bp Feature: domain Description: PRK0612 6 Location: 142 777-143902 bp Feature: domain Description: PRK06126 Location: 143938-144370 bp Feature: domain Description: PRK0612 6 Location: 143938-144370 bp Feature: gene Location: 144647-144784 bp Feature: gene Location: 144981-146690 bp Feature: RT Description: RVT_N Location: 145089-145335 bp Feature: RT Description: RVT_N Location: 145089-145335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145389-146049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145389-146049 bp Feature: domain Description: GIIM Note: maturase Location: 146115-146349 bp Feature: domain Description: GIIM Note: maturase Location: 146115-146349 bp Feature: gene Location: 147488-148015 bp Feature: domain Description: MdaB Location: 147491-148007 bp Feature: domain Description: MdaB Location: 147491-148007 bp Feature: gene Location: 148088-148447 bp Feature: domain Description: HxlR Location: 148133-148421 bp Feature: domain Description: HxlR Location: 148133-14842 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT THN_reductase-like_SDR_c (cd05362), YeiB (COG2311), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), ARO8 (COG1167), azlC (TIGR00346), PRK06126 (hypothetical protein; Provisional), MdaB (COG2249), HxlR (pfam01638)

Seq: JAAMPN010000062.1 Bacillus megaterium strain IN_866 tig00000001_np1212, whole genome shotgun sequence (5132859 bp)
Overview 1 RT 1: 1341740-1344602 bp 2 RT 2: 5057509-5062171 bp Neighborhood of RT #1 [1341740, 1344602] YdeN RVT-GII Neighborhood of RT #2 [5057509, 5062209] DAO RVT-GII Intron_maturas2 HNHc RimL Feature: gene Location: 1341740-1342306 bp Feature: domain Description: YdeN Location: 1341749-1342298 bp Feature: domain Description: YdeN Location: 13 41749-13 42298 bp Feature: gene Location: 1342712-1342846 bp Feature: gene Location: 1342948-1343766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1342954-1343590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 42954-13 43 590 bp Feature: gene Location: 1343800-1344231 bp Feature: gene Location: 1344456-1344602 bp Feature: gene Location: 5057509-5057649 bp Feature: gene Location: 5057688-5058875 bp Feature: domain Description: DAO Location: 5057922-5058870 bp Feature: domain Description: DAO Location: 5057922-5058870 bp Feature: gene Location: 5059448-5061271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5059712-5060546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5059712-5060546 bp Feature: domain Description: Intron_maturas2 Location: 5060618-5060915 bp Feature: domain Description: Intron_maturas2 Location: 5060618-5060915 bp Feature: domain Description: HNHc Note: nucleases Location: 5061092-5061245 bp Feature: domain Description: HNHc Note: nucleases Location: 5061092-5061245 bp Feature: gene Location: 5061275-5061439 bp Feature: gene Location: 5061562-5062209 bp Feature: domain Description: RimL Location: 5061640-5062171 bp Feature: domain Description: RimL Location: 5061640-5062171 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdeN (COG3545), RVT-GII, DAO (pfam01266), Intron_maturas2 (pfam01348), HNHc (smart00507), RimL (COG1670)