myRT

myRT report for GCA_008728595.2_ASM872859v2

Download annotations/find similar RTs

Seq: JAAMPP010000047.1 Bacillus megaterium strain IN_1371 plasmid pBM400 tig00000049_np1212, whole genome shotgun sequence (93007 bp)
Overview 1 RT 1: 9549-14575 bp 2 RT 2: 62093-66192 bp Neighborhood of RT #1 [9549, 14604] DUF4309 RVT-GII GIIM RVT_N STAS_RsbR_RsbS_like Neighborhood of RT #2 [62093, 66192] DUF4309 RVT-GII GIIM RVT_N Feature: gene Location: 9549-9821 bp Feature: gene Location: 10200-10475 bp Feature: domain Description: DUF4309 Location: 10221-10464 bp Feature: domain Description: DUF4309 Location: 1 0221 -1 0464 bp Feature: gene Location: 11009-11899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11081-11258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 081 -1 1 258 bp Feature: domain Description: GIIM Note: maturase Location: 11324-11558 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 324-1 1 558 bp Feature: gene Location: 12286-12714 bp Feature: domain Description: RVT_N Location: 12394-12640 bp Feature: domain Description: RVT_N Location: 1 2394-1 2640 bp Feature: gene Location: 14233-14604 bp Feature: domain Description: STAS_RsbR_RsbS_like Location: 14248-14575 bp Feature: domain Description: STAS_RsbR_RsbS_like Location: 1 4248-1 4575 bp Feature: gene Location: 62093-62500 bp Feature: gene Location: 62630-63208 bp Feature: domain Description: DUF4309 Location: 62786-63194 bp Feature: domain Description: DUF4309 Location: 62786-631 94 bp Feature: gene Location: 63560-64549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63566-63908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63566-63908 bp Feature: domain Description: GIIM Note: maturase Location: 63974-64208 bp Feature: domain Description: GIIM Note: maturase Location: 63974-64208 bp Feature: gene Location: 64841-65269 bp Feature: domain Description: RVT_N Location: 64949-65195 bp Feature: domain Description: RVT_N Location: 64949-651 95 bp Feature: gene Location: 65908-66192 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4309 (pfam14172), RVT-GII, GIIM (pfam08388), RVT_N (pfam13655), STAS_RsbR_RsbS_like (cd07041)

Seq: JAAMPP010000028.1 Bacillus megaterium strain IN_1371 plasmid pBM500 tig00020903_np1212, whole genome shotgun sequence (91352 bp)
Overview 1 RT 1: 37999-46123 bp Neighborhood of RT #1 [37999, 46134] DUF4241 RVT-GII GIIM RVT_N NfsB_like_nitroreductase RVT_N RVT-GII GIIM IS285 IS285 Feature: gene Location: 37999-38208 bp Feature: domain Description: DUF4241 Location: 38068-38155 bp Feature: domain Description: DUF42 41 Location: 38068-38155 bp Feature: gene Location: 38212-38565 bp Feature: gene Location: 38742-39731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38748-39090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38748-39090 bp Feature: domain Description: GIIM Note: maturase Location: 39156-39390 bp Feature: domain Description: GIIM Note: maturase Location: 39156-39390 bp Feature: gene Location: 40023-40391 bp Feature: domain Description: RVT_N Location: 40071-40317 bp Feature: domain Description: RVT_N Location: 40071-40317 bp Feature: gene Location: 41231-41902 bp Feature: domain Description: NfsB_like_nitroreductase Location: 41264-41888 bp Feature: domain Description: NfsB_like_nitroreductase Location: 412 64-41888 bp Feature: gene Location: 42652-44301 bp Feature: domain Description: RVT_N Location: 42700-42946 bp Feature: domain Description: RVT_N Location: 42 700-42 946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43000-43660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43000-43660 bp Feature: domain Description: GIIM Note: maturase Location: 43729-43960 bp Feature: domain Description: GIIM Note: maturase Location: 4372 9-43960 bp Feature: gene Location: 45237-45695 bp Feature: domain Description: IS285 Location: 45327-45687 bp Feature: domain Description: IS2 85 Location: 4532 7-45687 bp Feature: gene Location: 45571-46134 bp Feature: domain Description: IS285 Location: 45577-46123 bp Feature: domain Description: IS2 85 Location: 45577-4612 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4241 (pfam14025), RVT-GII, GIIM (pfam08388), RVT_N (pfam13655), NfsB_like_nitroreductase, IS285 (COG3328)

Seq: JAAMPP010000031.1 Bacillus megaterium strain IN_1371 plasmid pBM700 tig00000034_np1212, whole genome shotgun sequence (345747 bp)
Overview 1 RT 1: 22094-26144 bp 2 RT 2: 155430-161259 bp 3 RT 3: 192504-197258 bp 4 RT 4: 221514-226048 bp 5 RT 5: 238518-242323 bp 6 RT 6: 264723-269949 bp Neighborhood of RT #1 [22094, 26144] MGT MGT RVT_N RVT-GII RVT-GII GIIM Neighborhood of RT #2 [155430, 161259] MGT RVT_N RVT-GII GIIM Neighborhood of RT #3 [192504, 197258] COG3547 COG3547 Transposase_20 RVT_N RVT-GII RVT-GII GIIM Neighborhood of RT #4 [221514, 226053] HxlR Acetyltransf_1 RVT_N RVT-GII RVT-GII GIIM MFS_MefA_like Neighborhood of RT #5 [238518, 242323] ComEC RVT-GII RVT-GII KOG4768 Neighborhood of RT #6 [264723, 269949] RVT_N RVT-GII RVT-GII Feature: gene Location: 22094-22591 bp Feature: domain Description: MGT Location: 22142-22568 bp Feature: domain Description: MGT Location: 22142-22568 bp Feature: gene Location: 22611-23066 bp Feature: domain Description: MGT Location: 22614-23061 bp Feature: domain Description: MGT Location: 22614-23 061 bp Feature: gene Location: 23861-24436 bp Feature: domain Description: RVT_N Location: 23945-24191 bp Feature: domain Description: RVT_N Location: 23 945-24191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24245-24428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24245-24428 bp Feature: gene Location: 24450-25493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24456-24906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24456-24906 bp Feature: domain Description: GIIM Note: maturase Location: 24975-25206 bp Feature: domain Description: GIIM Note: maturase Location: 24975-25206 bp Feature: gene Location: 25695-25841 bp Feature: gene Location: 25932-26144 bp Feature: gene Location: 155430-156167 bp Feature: gene Location: 156299-157546 bp Feature: domain Description: MGT Location: 156356-157520 bp Feature: domain Description: MGT Location: 1563 56-157520 bp Feature: gene Location: 158293-159978 bp Feature: domain Description: RVT_N Location: 158377-158623 bp Feature: domain Description: RVT_N Location: 1583 77-158623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158677-159337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158677-1593 3 7 bp Feature: domain Description: GIIM Note: maturase Location: 159406-159637 bp Feature: domain Description: GIIM Note: maturase Location: 159406-15963 7 bp Feature: gene Location: 160124-160573 bp Feature: gene Location: 160792-161259 bp Feature: gene Location: 192504-193280 bp Feature: domain Description: COG3547 Location: 192534-192972 bp Feature: domain Description: COG3 547 Location: 19253 4-192972 bp Feature: domain Description: COG3547 Location: 193068-193251 bp Feature: domain Description: COG3 547 Location: 193 068-193 251 bp Feature: gene Location: 193298-193603 bp Feature: domain Description: Transposase_20 Location: 193304-193436 bp Feature: domain Description: Transposase_20 Location: 193 3 04-193 43 6 bp Feature: gene Location: 194889-195800 bp Feature: domain Description: RVT_N Location: 194973-195219 bp Feature: domain Description: RVT_N Location: 194973 -195219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195273-195738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195273 -19573 8 bp Feature: gene Location: 195827-196018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195833-195932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19583 3 -19593 2 bp Feature: gene Location: 196036-196572 bp Feature: domain Description: GIIM Note: maturase Location: 196045-196231 bp Feature: domain Description: GIIM Note: maturase Location: 196045-19623 1 bp Feature: gene Location: 197130-197258 bp Feature: gene Location: 221514-221846 bp Feature: domain Description: HxlR Location: 221550-221838 bp Feature: domain Description: HxlR Location: 221550-22183 8 bp Feature: gene Location: 222391-222786 bp Feature: domain Description: Acetyltransf_1 Location: 222409-222676 bp Feature: domain Description: Acetyltransf_1 Location: 222409-222676 bp Feature: gene Location: 223417-224328 bp Feature: domain Description: RVT_N Location: 223501-223747 bp Feature: domain Description: RVT_N Location: 223 501-223 747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 223801-224266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 223 801-224266 bp Feature: gene Location: 224355-224690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 224361-224460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2243 61-224460 bp Feature: domain Description: GIIM Note: maturase Location: 224526-224664 bp Feature: domain Description: GIIM Note: maturase Location: 224526-224664 bp Feature: gene Location: 224669-225100 bp Feature: gene Location: 225625-226053 bp Feature: domain Description: MFS_MefA_like Location: 225655-226048 bp Feature: domain Description: MFS_MefA_like Location: 225655-226048 bp Feature: gene Location: 238518-238847 bp Feature: domain Description: ComEC Location: 238521-238845 bp Feature: domain Description: ComEC Location: 23 8521-23 8845 bp Feature: gene Location: 239161-239331 bp Feature: gene Location: 239410-241221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239470-240001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 9470-240001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240352-240559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2403 52-240559 bp Feature: domain Description: KOG4768 Location: 240703-241006 bp Feature: domain Description: KOG4768 Location: 240703 -241006 bp Feature: gene Location: 241239-241436 bp Feature: gene Location: 242162-242323 bp Feature: gene Location: 264723-265010 bp Feature: gene Location: 266420-267007 bp Feature: gene Location: 268029-268787 bp Feature: domain Description: RVT_N Location: 268113-268359 bp Feature: domain Description: RVT_N Location: 268113 -2683 59 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268413-268680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268413 -268680 bp Feature: gene Location: 268900-269151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268912-269071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268912-269071 bp Feature: gene Location: 269323-269508 bp Feature: gene Location: 269542-269949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MGT (TIGR01426), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), Transposase_20 (pfam02371), HxlR (pfam01638), Acetyltransf_1 (pfam00583), MFS_MefA_like (cd06173), ComEC (COG2333)
KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: JAAMPP010000046.1 Bacillus megaterium strain IN_1371 plasmid pBMV_2 tig00000028_np1212, whole genome shotgun sequence (318615 bp)
Overview 1 RT 1: 122451-124938 bp 2 RT 2: 189339-191353 bp Neighborhood of RT #1 [122451, 125012] GIIM RVT-GII RVT_N Neighborhood of RT #2 [189339, 191397] group_II_RT_mat RVT-GII Intron_maturas2 TraG-D_C Feature: gene Location: 122451-122579 bp Feature: gene Location: 123281-123817 bp Feature: domain Description: GIIM Note: maturase Location: 123359-123476 bp Feature: domain Description: GIIM Note: maturase Location: 123359-1234 76 bp Feature: gene Location: 123835-124173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123919-124087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123919-124 087 bp Feature: gene Location: 124329-124457 bp Feature: gene Location: 124554-125012 bp Feature: domain Description: RVT_N Location: 124692-124938 bp Feature: domain Description: RVT_N Location: 124 692-124 938 bp Feature: gene Location: 189339-189512 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 189345-189486 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 18934 5-1894 86 bp Feature: gene Location: 190045-190176 bp Feature: gene Location: 190196-190411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190208-190280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190208-190280 bp Feature: gene Location: 190446-190763 bp Feature: domain Description: Intron_maturas2 Location: 190464-190653 bp Feature: domain Description: Intron_maturas2 Location: 1904 64 -190653 bp Feature: gene Location: 191104-191397 bp Feature: domain Description: TraG-D_C Location: 191113-191353 bp Feature: domain Description: TraG-D_C Location: 191113-191353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, RVT_N (pfam13655), group_II_RT_mat (TIGR04416), Intron_maturas2 (pfam01348), TraG-D_C (pfam12696)

Seq: JAAMPP010000052.1 Bacillus megaterium strain IN_1371 plasmid pKNU_01_3 tig00000033_np1212, whole genome shotgun sequence (160968 bp)
Overview 1 RT 1: 35936-41547 bp 2 RT 2: 141320-144016 bp Neighborhood of RT #1 [35936, 41570] AcrR MDR_like_2 RVT_N RVT-GII GIIM GsiB KGG KGG Neighborhood of RT #2 [141320, 144039] RVT_N RVT-GII GIIM GsiB KGG KGG Feature: gene Location: 35936-36634 bp Feature: domain Description: AcrR Location: 36101-36560 bp Feature: domain Description: AcrR Location: 36101-365 60 bp Feature: gene Location: 36823-37608 bp Feature: domain Description: MDR_like_2 Location: 36826-37597 bp Feature: domain Description: MDR_like_2 Location: 36826-375 97 bp Feature: gene Location: 38850-40535 bp Feature: domain Description: RVT_N Location: 38934-39180 bp Feature: domain Description: RVT_N Location: 38934-39180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39234-39894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39234-39894 bp Feature: domain Description: GIIM Note: maturase Location: 39963-40194 bp Feature: domain Description: GIIM Note: maturase Location: 39963-40194 bp Feature: gene Location: 40952-41098 bp Feature: gene Location: 41301-41570 bp Feature: domain Description: GsiB Location: 41307-41430 bp Feature: domain Description: GsiB Location: 41307-41430 bp Feature: domain Description: KGG Location: 41439-41490 bp Feature: domain Description: KGG Location: 41439-41490 bp Feature: domain Description: KGG Location: 41499-41547 bp Feature: domain Description: KGG Location: 41499-415 47 bp Feature: gene Location: 141320-141529 bp Feature: domain Description: RVT_N Location: 141404-141503 bp Feature: domain Description: RVT_N Location: 141404-1415 03 bp Feature: gene Location: 141786-141953 bp Feature: gene Location: 142017-142952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142023-142365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142023-142365 bp Feature: domain Description: GIIM Note: maturase Location: 142434-142665 bp Feature: domain Description: GIIM Note: maturase Location: 142434-142665 bp Feature: gene Location: 143421-143567 bp Feature: gene Location: 143770-144039 bp Feature: domain Description: GsiB Location: 143776-143899 bp Feature: domain Description: GsiB Location: 143776-143899 bp Feature: domain Description: KGG Location: 143908-143959 bp Feature: domain Description: KGG Location: 143908-14395 9 bp Feature: domain Description: KGG Location: 143968-144016 bp Feature: domain Description: KGG Location: 143968-144016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), MDR_like_2 (cd05289), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), GsiB (COG3729), KGG (pfam10685)

Seq: JAAMPP010000043.1 Bacillus megaterium strain IN_1371 plasmid unnamed1 tig00000040_np1212, whole genome shotgun sequence (112483 bp)
Overview 1 RT 1: 48902-53117 bp 2 RT 2: 57221-60757 bp 3 RT 3: 65539-68812 bp Neighborhood of RT #1 [48902, 53117] RVT-GII Intron_maturas2 Neighborhood of RT #2 [57221, 60757] RVT-GII RVT-GII HNHc Neighborhood of RT #3 [65539, 68829] CwlT_like group_II_RT_mat RVT-GII RVT-GII KOG4768 Spr Feature: gene Location: 48902-49126 bp Feature: gene Location: 49280-49549 bp Feature: gene Location: 50242-51954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50506-51337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50506 -51337 bp Feature: domain Description: Intron_maturas2 Location: 51406-51751 bp Feature: domain Description: Intron_maturas2 Location: 51406 -51751 bp Feature: gene Location: 52201-52392 bp Feature: gene Location: 52590-53117 bp Feature: gene Location: 57221-57451 bp Feature: gene Location: 57626-58009 bp Feature: gene Location: 58687-59313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59038-59299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59038-59299 bp Feature: gene Location: 59436-59723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59439-59718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59439-59718 bp Feature: gene Location: 59830-60528 bp Feature: domain Description: HNHc Note: nucleases Location: 60304-60406 bp Feature: domain Description: HNHc Note: nucleases Location: 6 0304-6 0406 bp Feature: gene Location: 60602-60757 bp Feature: gene Location: 65539-65973 bp Feature: domain Description: CwlT_like Location: 65548-65962 bp Feature: domain Description: CwlT_like Location: 6 5548-6 596 2 bp Feature: gene Location: 66546-66839 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 66651-66831 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 6 6 6 51-6 6 831 bp Feature: gene Location: 66902-67282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67007-67244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 7007-6 7244 bp Feature: gene Location: 67311-67703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67374-67641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 7374-6 76 41 bp Feature: gene Location: 67724-68365 bp Feature: domain Description: KOG4768 Location: 67745-68357 bp Feature: domain Description: KOG476 8 Location: 6 7745-6 8357 bp Feature: gene Location: 68491-68829 bp Feature: domain Description: Spr Location: 68563-68812 bp Feature: domain Description: Spr Location: 6 856 3-6 8812 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlT_like, group_II_RT_mat (TIGR04416), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), Spr (COG0791)

Seq: JAAMPP010000030.1 Bacillus megaterium strain IN_1371 plasmid unnamed2 tig00000031_np1212, whole genome shotgun sequence (185779 bp)
Overview 1 RT 1: 4890-12586 bp 2 RT 2: 107653-113751 bp 3 RT 3: 140348-146855 bp Neighborhood of RT #1 [4890, 12597] RVT-GII RVT-GII RVT_N RVT-GII KOG0725 adh_short RVT_N RVT-GII GIIM SpoOE-like PRK12879 Neighborhood of RT #2 [107653, 113756] GIIM RVT_N RVT-GII PRK12444 COG3603 Neighborhood of RT #3 [140348, 146878] RVT-GII RVT_N RVT-GII SDR_c RVT_N RVT-GII GIIM SpoOE-like Feature: gene Location: 4890-5045 bp Feature: gene Location: 5446-5823 bp Feature: gene Location: 5944-6090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5950-6004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5950-6004 bp Feature: gene Location: 6161-6376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6167-6332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6167 -6332 bp Feature: gene Location: 6463-7095 bp Feature: domain Description: RVT_N Location: 6571-6817 bp Feature: domain Description: RVT_N Location: 657 1-6817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6871-7012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 687 1-7 012 bp Feature: gene Location: 7486-7677 bp Feature: gene Location: 7801-8040 bp Feature: domain Description: KOG0725 Location: 7804-7996 bp Feature: domain Description: KOG07 25 Location: 7 804-7 996 bp Feature: gene Location: 8207-8518 bp Feature: domain Description: adh_short Location: 8294-8489 bp Feature: domain Description: adh_short Location: 8294-8489 bp Feature: gene Location: 8683-10332 bp Feature: domain Description: RVT_N Location: 8731-8977 bp Feature: domain Description: RVT_N Location: 87 31-897 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9031-9691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9031-9691 bp Feature: domain Description: GIIM Note: maturase Location: 9760-9991 bp Feature: domain Description: GIIM Note: maturase Location: 97 60-9991 bp Feature: gene Location: 11239-11397 bp Feature: domain Description: SpoOE-like Location: 11257-11374 bp Feature: domain Description: SpoOE-like Location: 11257 -1137 4 bp Feature: gene Location: 11863-12597 bp Feature: domain Description: PRK12879 Location: 11866-12586 bp Feature: domain Description: PRK1287 9 Location: 11866-12586 bp Feature: gene Location: 107653-107898 bp Feature: gene Location: 108201-108899 bp Feature: domain Description: GIIM Note: maturase Location: 108327-108558 bp Feature: domain Description: GIIM Note: maturase Location: 108327 -108558 bp Feature: gene Location: 108808-109851 bp Feature: domain Description: RVT_N Location: 108856-109102 bp Feature: domain Description: RVT_N Location: 108856-109102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109156-109816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109156-109816 bp Feature: gene Location: 111336-113261 bp Feature: domain Description: PRK12444 Location: 111339-113253 bp Feature: domain Description: PRK12444 Location: 111339-113253 bp Feature: gene Location: 113577-113756 bp Feature: domain Description: COG3603 Location: 113583-113751 bp Feature: domain Description: COG3603 Location: 113583-1137 51 bp Feature: gene Location: 140348-140644 bp Feature: gene Location: 140857-141288 bp Feature: gene Location: 141417-141560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141423-141477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141423-14147 7 bp Feature: gene Location: 141562-142569 bp Feature: domain Description: RVT_N Location: 141670-141916 bp Feature: domain Description: RVT_N Location: 14167 0-141916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141970-142561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14197 0-142561 bp Feature: gene Location: 143191-143925 bp Feature: domain Description: SDR_c Location: 143212-143902 bp Feature: domain Description: SDR_c Location: 143212-143902 bp Feature: gene Location: 144161-145810 bp Feature: domain Description: RVT_N Location: 144209-144455 bp Feature: domain Description: RVT_N Location: 144209-144455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144509-145169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144509-145169 bp Feature: domain Description: GIIM Note: maturase Location: 145238-145469 bp Feature: domain Description: GIIM Note: maturase Location: 145238-145469 bp Feature: gene Location: 146255-146476 bp Feature: gene Location: 146720-146878 bp Feature: domain Description: SpoOE-like Location: 146738-146855 bp Feature: domain Description: SpoOE-like Location: 1467 38-146855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655), KOG0725 (KOG0725, Reductases with broad range of substrate specificities ), adh_short (pfam00106), GIIM (pfam08388), SpoOE-like (pfam09388), PRK12879 (3-oxoacyl-(acyl carrier protein) synthase III; Reviewed), PRK12444 (threonyl-tRNA synthetase; Reviewed), COG3603 (Uncharacterized protein ), SDR_c (cd05233)

Seq: JAAMPP010000026.1 Bacillus megaterium strain IN_1371 tig00020902_np1212, whole genome shotgun sequence (63715 bp)
Overview 1 RT 1: 40763-48876 bp Neighborhood of RT #1 [40763, 48876] GIIM RVT-GII RVT_N NfsB_like_nitroreductase RVT-GII RVT_N RVT-GII IS285 Feature: gene Location: 40763-41086 bp Feature: gene Location: 41291-41830 bp Feature: domain Description: GIIM Note: maturase Location: 41303-41489 bp Feature: domain Description: GIIM Note: maturase Location: 41303-4148 9 bp Feature: gene Location: 41845-42180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41917-42094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41917-42094 bp Feature: gene Location: 42565-42933 bp Feature: domain Description: RVT_N Location: 42613-42859 bp Feature: domain Description: RVT_N Location: 42613-428 59 bp Feature: gene Location: 43899-44441 bp Feature: domain Description: NfsB_like_nitroreductase Location: 43902-44427 bp Feature: domain Description: NfsB_like_nitroreductase Location: 43902-44427 bp Feature: gene Location: 45236-45451 bp Feature: gene Location: 45461-45814 bp Feature: gene Location: 45879-46070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45927-46065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45927-46065 bp Feature: gene Location: 46232-46831 bp Feature: domain Description: RVT_N Location: 46280-46526 bp Feature: domain Description: RVT_N Location: 4628 0-46526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46580-46814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4658 0-468 14 bp Feature: gene Location: 47766-48662 bp Feature: domain Description: IS285 Location: 47772-48654 bp Feature: domain Description: IS28 5 Location: 47772-48 654 bp Feature: gene Location: 48691-48876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, RVT_N (pfam13655), NfsB_like_nitroreductase, IS285 (COG3328)

Seq: JAAMPP010000027.1 Bacillus megaterium strain IN_1371 tig00000036_np1212, whole genome shotgun sequence (112840 bp)
Overview 1 RT 1: 22647-26087 bp 2 RT 2: 64561-69560 bp 3 RT 3: 107980-111380 bp Neighborhood of RT #1 [22647, 26113] EfiE RVT-AbiA SLATT_5 Neighborhood of RT #2 [64561, 69560] EfiE EfiE RVT-AbiA SLATT_5 Neighborhood of RT #3 [107980, 111445] EfiE RVT-UG13 SLATT_5 Feature: gene Location: 22647-23393 bp Feature: domain Description: EfiE Location: 22668-23382 bp Feature: domain Description: EfiE Location: 22668-23382 bp Feature: gene Location: 24114-24512 bp Feature: gene Location: 24557-24895 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 24563-24812 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 24563-24812 bp Feature: gene Location: 24984-25229 bp Feature: gene Location: 25490-26113 bp Feature: domain Description: SLATT_5 Location: 25493-26087 bp Feature: domain Description: SLATT_5 Location: 2549 3-26087 bp Feature: gene Location: 64561-65325 bp Feature: domain Description: EfiE Location: 64567-65266 bp Feature: domain Description: EfiE Location: 64567-65266 bp Feature: gene Location: 65331-66077 bp Feature: domain Description: EfiE Location: 65352-66066 bp Feature: domain Description: EfiE Location: 65352-66066 bp Feature: gene Location: 66742-68181 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 67138-67591 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 67138-6759 1 bp Feature: gene Location: 68192-68902 bp Feature: domain Description: SLATT_5 Location: 68228-68870 bp Feature: domain Description: SLATT_5 Location: 68228-68870 bp Feature: gene Location: 69264-69560 bp Feature: gene Location: 107980-108726 bp Feature: domain Description: EfiE Location: 108001-108715 bp Feature: domain Description: EfiE Location: 108001-108715 bp Feature: gene Location: 109446-109844 bp Feature: gene Location: 109889-110092 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 109916-110009 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 109 9 16-110009 bp Feature: gene Location: 110315-110560 bp Feature: gene Location: 111008-111445 bp Feature: domain Description: SLATT_5 Location: 111011-111380 bp Feature: domain Description: SLATT_5 Location: 111011-111380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EfiE (COG4200), RVT-AbiA, SLATT_5 (pfam18160), RVT-UG13

Seq: JAAMPP010000029.1 Bacillus megaterium strain IN_1371 tig00000038_np1212, whole genome shotgun sequence (164565 bp)
Overview 1 RT 1: 55737-60819 bp Neighborhood of RT #1 [55737, 60866] HmoA RVT-GII GIIM RVT_N RVT-GII RimL Feature: gene Location: 55737-56117 bp Feature: domain Description: HmoA Location: 55836-56106 bp Feature: domain Description: HmoA Location: 55836-5610 6 bp Feature: gene Location: 56409-56960 bp Feature: gene Location: 57238-58128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57310-57487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57310 -57487 bp Feature: domain Description: GIIM Note: maturase Location: 57553-57787 bp Feature: domain Description: GIIM Note: maturase Location: 57553-57787 bp Feature: gene Location: 58145-58948 bp Feature: domain Description: RVT_N Location: 58253-58499 bp Feature: domain Description: RVT_N Location: 58253-58499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58553-58937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58553-58937 bp Feature: gene Location: 59524-60072 bp Feature: gene Location: 60261-60866 bp Feature: domain Description: RimL Location: 60291-60819 bp Feature: domain Description: RimL Location: 60291-60819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HmoA (COG2329), RVT-GII, GIIM (pfam08388), RVT_N (pfam13655), RimL (COG1670)

Seq: JAAMPP010000035.1 Bacillus megaterium strain IN_1371 tig00000001_np1212, whole genome shotgun sequence (5195541 bp)
Overview 1 RT 1: 979925-984883 bp 2 RT 2: 4707921-4712279 bp Neighborhood of RT #1 [979925, 984900] 2a38 YdeN RVT_N RVT-GII RVT-GII GIIM DUF3231 DUF3231 Neighborhood of RT #2 [4707921, 4712279] DAO RVT-GII Intron_maturas2 HNHc DadA Feature: gene Location: 979925-980422 bp Feature: domain Description: 2a38 Location: 979997-980264 bp Feature: domain Description: 2a38 Location: 979997-980264 bp Feature: gene Location: 980693-981259 bp Feature: domain Description: YdeN Location: 980702-981251 bp Feature: domain Description: YdeN Location: 980702-981251 bp Feature: gene Location: 981966-982745 bp Feature: domain Description: RVT_N Location: 982050-982293 bp Feature: domain Description: RVT_N Location: 982050-982293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982350-982734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982350-982734 bp Feature: gene Location: 982762-983187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982834-983011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982834-983011 bp Feature: domain Description: GIIM Note: maturase Location: 983077-983185 bp Feature: domain Description: GIIM Note: maturase Location: 983077-983185 bp Feature: gene Location: 983221-983652 bp Feature: gene Location: 983896-984900 bp Feature: domain Description: DUF3231 Location: 983911-984367 bp Feature: domain Description: DUF3231 Location: 983911 -984367 bp Feature: domain Description: DUF3231 Location: 984403-984883 bp Feature: domain Description: DUF3231 Location: 984403-984883 bp Feature: gene Location: 4707921-4708061 bp Feature: gene Location: 4708100-4709287 bp Feature: domain Description: DAO Location: 4708334-4709282 bp Feature: domain Description: DAO Location: 4708334-4709282 bp Feature: gene Location: 4709860-4711683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4710124-4710958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4710124-4710958 bp Feature: domain Description: Intron_maturas2 Location: 4711030-4711330 bp Feature: domain Description: Intron_maturas2 Location: 4711 030-4711 330 bp Feature: domain Description: HNHc Note: nucleases Location: 4711504-4711657 bp Feature: domain Description: HNHc Note: nucleases Location: 4711 504-4711 657 bp Feature: gene Location: 4711687-4711971 bp Feature: domain Description: DadA Location: 4711783-4711945 bp Feature: domain Description: DadA Location: 4711 783-4711 945 bp Feature: gene Location: 4712049-4712279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 2a38 (TIGR00933), YdeN (COG3545), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3231 (pfam11553), DAO (pfam01266), Intron_maturas2 (pfam01348), HNHc (smart00507), DadA (COG0665)

Seq: JAAMPP010000054.1 Bacillus megaterium strain IN_1371 tig00000030_np1212, whole genome shotgun sequence (164965 bp)
Overview 1 RT 1: 92024-96747 bp 2 RT 2: 101760-104938 bp Neighborhood of RT #1 [92024, 96800] SufI RVT-GII GIIM RVT_N RVT-GII BclA_C Neighborhood of RT #2 [101760, 105045] RVT-GII GIIM RVT_N ABM Feature: gene Location: 92024-92176 bp Feature: gene Location: 92232-93728 bp Feature: domain Description: SufI Location: 92352-93693 bp Feature: domain Description: SufI Location: 92352-93693 bp Feature: gene Location: 93969-94715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93978-94074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93978-94074 bp Feature: domain Description: GIIM Note: maturase Location: 94140-94374 bp Feature: domain Description: GIIM Note: maturase Location: 94140-94374 bp Feature: gene Location: 94720-95619 bp Feature: domain Description: RVT_N Location: 94768-95014 bp Feature: domain Description: RVT_N Location: 94768-95014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95068-95608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95068-95608 bp Feature: gene Location: 96341-96487 bp Feature: gene Location: 96552-96800 bp Feature: domain Description: BclA_C Location: 96624-96747 bp Feature: domain Description: BclA_C Location: 96624-96747 bp Feature: gene Location: 101760-102332 bp Feature: gene Location: 102492-102761 bp Feature: gene Location: 102832-103752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102835-103450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102835-103450 bp Feature: domain Description: GIIM Note: maturase Location: 103516-103726 bp Feature: domain Description: GIIM Note: maturase Location: 103516-103726 bp Feature: gene Location: 103773-104072 bp Feature: domain Description: RVT_N Location: 103821-104049 bp Feature: domain Description: RVT_N Location: 103821-104049 bp Feature: gene Location: 104707-105045 bp Feature: domain Description: ABM Location: 104737-104938 bp Feature: domain Description: ABM Location: 104737-104938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SufI (COG2132), RVT-GII, GIIM (pfam08388), RVT_N (pfam13655), BclA_C (pfam18573), ABM (pfam03992)