myRT

myRT report for GCA_008756975.1_ASM875697v1

Download annotations/find similar RTs

Seq: VXDD01000001.1 Vibrio fortis strain S7-72 scaffold_1, whole genome shotgun sequence (2830291 bp)
Overview 1 RT 1: 2126452-2133437 bp 2 RT 2: 2725120-2734053 bp Neighborhood of RT #1 [2126452, 2133718] TniQ RVT-UG1 SSL2 Neighborhood of RT #2 [2725120, 2734055] FcbT1 fis RVT_N RVT-GII GIIM RVT_N RVT-GII RVT-GII GIIM PRK00331 Feature: gene Location: 2126452-2127663 bp Feature: domain Description: TniQ Location: 2126467-2126920 bp Feature: domain Description: TniQ Location: 21 26467-21 26920 bp Feature: gene Location: 2127786-2128238 bp Feature: gene Location: 2128235-2132146 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2128925-2129468 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 21 28925-21 29468 bp Feature: gene Location: 2132158-2132361 bp Feature: gene Location: 2132447-2133718 bp Feature: domain Description: SSL2 Location: 2132666-2133437 bp Feature: domain Description: SSL2 Location: 21 32666-21 33437 bp Feature: gene Location: 2725120-2726220 bp Feature: domain Description: FcbT1 Location: 2725177-2726215 bp Feature: domain Description: FcbT1 Location: 27251 77-272621 5 bp Feature: gene Location: 2726634-2726906 bp Feature: domain Description: fis Location: 2726763-2726868 bp Feature: domain Description: fis Location: 2726763-2726868 bp Feature: gene Location: 2727267-2728781 bp Feature: domain Description: RVT_N Location: 2727357-2727600 bp Feature: domain Description: RVT_N Location: 2727357-2727600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2727645-2728272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2727645-2728272 bp Feature: domain Description: GIIM Note: maturase Location: 2728332-2728557 bp Feature: domain Description: GIIM Note: maturase Location: 2728332-2728557 bp Feature: gene Location: 2729462-2729683 bp Feature: gene Location: 2730487-2731278 bp Feature: domain Description: RVT_N Location: 2730535-2730778 bp Feature: domain Description: RVT_N Location: 2730535-2730778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2730823-2731258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2730823-2731 258 bp Feature: gene Location: 2731328-2731960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2731340-2731451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2731 340-2731 451 bp Feature: domain Description: GIIM Note: maturase Location: 2731511-2731736 bp Feature: domain Description: GIIM Note: maturase Location: 2731 51 1 -2731 736 bp Feature: gene Location: 2732009-2732221 bp Feature: gene Location: 2732223-2734055 bp Feature: domain Description: PRK00331 Location: 2732226-2734053 bp Feature: domain Description: PRK00331 Location: 2732226-2734053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TniQ (pfam06527), RVT-UG1, SSL2 (COG1061), FcbT1 (COG4663), fis (PRK00430), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK00331 (isomerizing glutamine--fructose-6-phosphate transaminase)

Seq: VXDD01000005.1 Vibrio fortis strain S7-72 scaffold_5, whole genome shotgun sequence (414556 bp)
Overview 1 RT 1: 3503-7876 bp 2 RT 2: 59651-65906 bp 3 RT 3: 75417-79263 bp 4 RT 4: 409233-413605 bp Neighborhood of RT #1 [3503, 7905] PHA02517 InsE RVT_N RVT-GII GIIM RimL Neighborhood of RT #2 [59651, 65906] ARO8 COG3547 RVT-UG7 Neighborhood of RT #3 [75417, 79271] RVT_N RVT-GII GIIM PHA02517 InsE Neighborhood of RT #4 [409233, 413619] PHA02517 InsE RVT_N RVT-GII GIIM RimL Feature: gene Location: 3503-4354 bp Feature: domain Description: PHA02517 Location: 3557-4343 bp Feature: domain Description: PHA02 517 Location: 3557-4343 bp Feature: gene Location: 4369-4653 bp Feature: domain Description: InsE Location: 4390-4645 bp Feature: domain Description: InsE Location: 4390-4645 bp Feature: gene Location: 4850-6469 bp Feature: domain Description: RVT_N Location: 5057-5300 bp Feature: domain Description: RVT_N Location: 5057-5300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5345-5960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5345-5960 bp Feature: domain Description: GIIM Note: maturase Location: 6020-6245 bp Feature: domain Description: GIIM Note: maturase Location: 602 0-62 45 bp Feature: gene Location: 6505-6828 bp Feature: gene Location: 7327-7905 bp Feature: domain Description: RimL Location: 7381-7876 bp Feature: domain Description: RimL Location: 7381-7876 bp Feature: gene Location: 59651-61009 bp Feature: domain Description: ARO8 Location: 59687-61001 bp Feature: domain Description: ARO8 Location: 59687-61001 bp Feature: gene Location: 61241-62257 bp Feature: domain Description: COG3547 Location: 61259-62222 bp Feature: domain Description: COG3547 Location: 612 59-62 2 2 2 bp Feature: gene Location: 62915-64459 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 63302-63719 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 63302 -63719 bp Feature: gene Location: 64626-65225 bp Feature: gene Location: 65493-65906 bp Feature: gene Location: 75417-75707 bp Feature: gene Location: 75812-75994 bp Feature: gene Location: 76035-77654 bp Feature: domain Description: RVT_N Location: 76242-76485 bp Feature: domain Description: RVT_N Location: 762 42 -76485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76530-77145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76530-77145 bp Feature: domain Description: GIIM Note: maturase Location: 77205-77430 bp Feature: domain Description: GIIM Note: maturase Location: 772 05-77430 bp Feature: gene Location: 78121-78972 bp Feature: domain Description: PHA02517 Location: 78175-78961 bp Feature: domain Description: PHA02 517 Location: 78175-78961 bp Feature: gene Location: 78987-79271 bp Feature: domain Description: InsE Location: 79008-79263 bp Feature: domain Description: InsE Location: 79008-792 63 bp Feature: gene Location: 409233-410084 bp Feature: domain Description: PHA02517 Location: 409287-410073 bp Feature: domain Description: PHA02 517 Location: 4092 87-410073 bp Feature: gene Location: 410099-410383 bp Feature: domain Description: InsE Location: 410120-410375 bp Feature: domain Description: InsE Location: 41012 0-410375 bp Feature: gene Location: 410580-412199 bp Feature: domain Description: RVT_N Location: 410787-411030 bp Feature: domain Description: RVT_N Location: 410787-411030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 411075-411690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 411075-411690 bp Feature: domain Description: GIIM Note: maturase Location: 411750-411975 bp Feature: domain Description: GIIM Note: maturase Location: 411750-411975 bp Feature: gene Location: 412235-412558 bp Feature: gene Location: 413056-413619 bp Feature: domain Description: RimL Location: 413110-413605 bp Feature: domain Description: RimL Location: 413110-413605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), RimL (COG1670), ARO8 (COG1167), COG3547 (Transposase ), RVT-UG7