myRT

myRT report for GCA_008757015.1_ASM875701v1

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Seq: VZAB01000002.1 Janthinobacterium sp. SLB01 scaffold2, whole genome shotgun sequence (3811668 bp)
Overview 1 RT 1: 1501545-1508140 bp 2 RT 2: 3647546-3656074 bp Neighborhood of RT #1 [1501545, 1508140] RVT-UG7 Neighborhood of RT #2 [3647546, 3656112] PRK10770 LptD RVT_N RVT-GII GIIM HNHc COG3178 NTP_transferase_like_1 Feature: gene Location: 1501545-1502000 bp Feature: gene Location: 1502926-1503066 bp Feature: gene Location: 1504197-1505843 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1504578-1504992 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 504578-1 504992 bp Feature: gene Location: 1506963-1507112 bp Feature: gene Location: 1507196-1508140 bp Feature: gene Location: 3647546-3648967 bp Feature: domain Description: PRK10770 Location: 3647735-3648950 bp Feature: domain Description: PRK1 0770 Location: 3647735-3648950 bp Feature: gene Location: 3649038-3651293 bp Feature: domain Description: LptD Location: 3649092-3651207 bp Feature: domain Description: LptD Location: 3649092-3651 207 bp Feature: gene Location: 3652435-3654138 bp Feature: domain Description: RVT_N Location: 3652495-3652738 bp Feature: domain Description: RVT_N Location: 3652495-3652738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3652783-3653431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3652783-3653431 bp Feature: domain Description: GIIM Note: maturase Location: 3653482-3653716 bp Feature: domain Description: GIIM Note: maturase Location: 3653482-365371 6 bp Feature: domain Description: HNHc Note: nucleases Location: 3653950-3654100 bp Feature: domain Description: HNHc Note: nucleases Location: 3653950-36541 00 bp Feature: gene Location: 3654263-3655330 bp Feature: domain Description: COG3178 Location: 3654290-3655304 bp Feature: domain Description: COG31 78 Location: 3654290-3655304 bp Feature: gene Location: 3655393-3656112 bp Feature: domain Description: NTP_transferase_like_1 Location: 3655399-3656074 bp Feature: domain Description: NTP_transferase_like_1 Location: 3655399-3656074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)