myRT

myRT report for GCA_008761985.1_ASM876198v1

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Seq: VOJW01000004.1 Mycobacterium tuberculosis strain NRL 2017/1 contig004_Mycobacterium_tuberculosis, whole genome shotgun sequence (196300 bp)
Overview 1 RT 1: 21356-26403 bp Neighborhood of RT #1 [21356, 26423] LolD CAP_ED LolE SalY RVT-GII PRK13034 Feature: gene Location: 21356-22348 bp Feature: domain Description: LolD Location: 21371-22004 bp Feature: domain Description: LolD Location: 21 371 -22004 bp Feature: domain Description: CAP_ED Location: 22037-22295 bp Feature: domain Description: CAP_ED Location: 22037-22295 bp Feature: gene Location: 22351-23400 bp Feature: domain Description: LolE Location: 22357-22690 bp Feature: domain Description: LolE Location: 22357-22690 bp Feature: domain Description: SalY Location: 22972-23389 bp Feature: domain Description: SalY Location: 22972-23389 bp Feature: gene Location: 23831-24556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24062-24374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24062-24374 bp Feature: gene Location: 24922-25071 bp Feature: gene Location: 25146-26423 bp Feature: domain Description: PRK13034 Location: 25158-26403 bp Feature: domain Description: PRK1 3034 Location: 251 58-26403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LolD (COG1136), CAP_ED (cl00047), LolE (COG4591), SalY (COG0577), RVT-GII, PRK13034 (serine hydroxymethyltransferase; Reviewed)

Seq: VOJW01000047.1 Mycobacterium tuberculosis strain NRL 2017/1 contig047_Mycobacterium_tuberculosis, whole genome shotgun sequence (3920 bp)
Overview 1 RT 1: 1-3868 bp Neighborhood of RT #1 [1, 3868] L1-EN RVT-UNC Feature: gene Location: 1-234 bp Feature: gene Location: 645-3827 bp Feature: domain Description: L1-EN Location: 933-1644 bp Feature: domain Description: L1-EN Location: 933-1644 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2565-3246 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2 565-32 46 bp Feature: gene Location: 3671-3868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG11/RVT-GII/RVT-CRISPR/RVT-DGRs(RVT-UNC)

Seq: VOJW01000089.1 Mycobacterium tuberculosis strain NRL 2017/1 contig089_Mycobacterium_tuberculosis, whole genome shotgun sequence (576 bp)
Overview 1 RT 1: 1-403 bp Neighborhood of RT #1 [1, 564] RVT-CRISPR-like Feature: gene Location: 1-564 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 25-403 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 25-403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR