myRT

myRT report for GCA_008764025.1_FS520

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Seq: VTQI01001391.1 Bacillus oceanisediminis 2691 strain DE0392 NODE_1391_length_228_cov_1.031414, whole genome shotgun sequence (228 bp)
Overview 1 RT 1: 1-226 bp Neighborhood of RT #1 [1, 225] RVT-CRISPR-like Feature: gene Location: 1-225 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 106-226 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 06-226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: VTQI01000278.1 Bacillus oceanisediminis 2691 strain DE0392 NODE_278_length_576_cov_185.033395, whole genome shotgun sequence (576 bp)
Overview 1 RT 1: 2-572 bp Neighborhood of RT #1 [2, 574] RVT-GII Feature: gene Location: 2-574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VTQI01000385.1 Bacillus oceanisediminis 2691 strain DE0392 NODE_385_length_439_cov_198.400498, whole genome shotgun sequence (439 bp)
Overview 1 RT 1: 3-360 bp Neighborhood of RT #1 [3, 359] RVT-GII Feature: gene Location: 3-359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 309-360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 09-3 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VTQI01000039.1 Bacillus oceanisediminis 2691 strain DE0392 NODE_39_length_31090_cov_131.780375, whole genome shotgun sequence (31090 bp)
Overview 1 RT 1: 23452-30535 bp Neighborhood of RT #1 [23452, 31065] RVT-AbiA HEPN_AbiA_CTD COG3587 N6_N4_Mtase Feature: gene Location: 23452-24321 bp Feature: gene Location: 24710-24904 bp Feature: gene Location: 25046-26920 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 25391-25892 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 25391-25892 bp Feature: domain Description: HEPN_AbiA_CTD Location: 26525-26903 bp Feature: domain Description: HEPN_AbiA_CTD Location: 26525-26903 bp Feature: gene Location: 27112-30099 bp Feature: domain Description: COG3587 Location: 27115-30085 bp Feature: domain Description: COG3587 Location: 27115-30085 bp Feature: gene Location: 30115-31065 bp Feature: domain Description: N6_N4_Mtase Location: 30310-30535 bp Feature: domain Description: N6_N4 _Mtase Location: 30310-30535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiA, HEPN_AbiA_CTD (pfam18732), COG3587 (Restriction endonuclease ), N6_N4_Mtase (pfam01555)

Seq: VTQI01000053.1 Bacillus oceanisediminis 2691 strain DE0392 NODE_53_length_26671_cov_151.387362, whole genome shotgun sequence (26671 bp)
Overview 1 RT 1: 22300-26656 bp Neighborhood of RT #1 [22300, 26670] VLCAD fadE RVT-GII InsE PHA02517 Feature: gene Location: 22300-24084 bp Feature: domain Description: VLCAD Location: 22375-23569 bp Feature: domain Description: VLCAD Location: 22375 -235 69 bp Feature: domain Description: fadE Location: 23710-24016 bp Feature: domain Description: fadE Location: 23710-24016 bp Feature: gene Location: 24350-24643 bp Feature: gene Location: 24679-25608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24877-25495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24877-25 495 bp Feature: gene Location: 25673-25984 bp Feature: domain Description: InsE Location: 25682-25937 bp Feature: domain Description: InsE Location: 25 682-25 937 bp Feature: gene Location: 26023-26670 bp Feature: domain Description: PHA02517 Location: 26041-26656 bp Feature: domain Description: PHA025 17 Location: 26041-2665 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VLCAD (cd01161), fadE (PRK09463), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)