myRT

myRT report for GCA_008795985.1_ASM879598v1

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Seq: VMHP01000001.1 Marinobacter halotolerans strain NBRC 110910 NODE_1_length_2234069_cov_63.403026, whole genome shotgun sequence (2234069 bp)
Overview 1 RT 1: 1529412-1536650 bp Neighborhood of RT #1 [1529412, 1536682] DUF1329 DUF1302 RVT-GII GIIM PRK07529 Feature: gene Location: 1529412-1530755 bp Feature: domain Description: DUF1329 Location: 1529661-1530735 bp Feature: domain Description: DUF1 329 Location: 1 529661 -1 530735 bp Feature: gene Location: 1530782-1532530 bp Feature: domain Description: DUF1302 Location: 1530917-1532528 bp Feature: domain Description: DUF1 302 Location: 1 53091 7-1 532528 bp Feature: gene Location: 1532810-1534222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1533155-1533773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5331 55-1 533773 bp Feature: domain Description: GIIM Note: maturase Location: 1533824-1534049 bp Feature: domain Description: GIIM Note: maturase Location: 1 533824-1 534049 bp Feature: gene Location: 1534242-1534433 bp Feature: gene Location: 1534718-1536682 bp Feature: domain Description: PRK07529 Location: 1534826-1536650 bp Feature: domain Description: PRK07529 Location: 1 534826-1 536650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1329 (pfam07044), DUF1302 (pfam06980), RVT-GII, GIIM (pfam08388), PRK07529 (AMP-binding domain protein; Validated)

Seq: VMHP01000002.1 Marinobacter halotolerans strain NBRC 110910 NODE_2_length_1343882_cov_60.149585, whole genome shotgun sequence (1343882 bp)
Overview 1 RT 1: 363979-372382 bp Neighborhood of RT #1 [363979, 372387] HsdM PRK09737 RVT-Retrons PRK09736 PRK11331 Feature: gene Location: 363979-365607 bp Feature: domain Description: HsdM Location: 363985-365257 bp Feature: domain Description: HsdM Location: 363985-3652 57 bp Feature: gene Location: 365607-366980 bp Feature: domain Description: PRK09737 Location: 365610-366945 bp Feature: domain Description: PRK09737 Location: 365610-366945 bp Feature: gene Location: 367005-368843 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 367140-367836 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 367140-367836 bp Feature: gene Location: 369107-370180 bp Feature: domain Description: PRK09736 Location: 369119-370145 bp Feature: domain Description: PRK09736 Location: 369119-370145 bp Feature: gene Location: 370183-372387 bp Feature: domain Description: PRK11331 Location: 370993-372382 bp Feature: domain Description: PRK11331 Location: 370993-372 382 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), PRK09737 (type I restriction-modification system specificity subunit), RVT-Retrons, PRK09736 (5-methylcytosine-specific restriction enzyme subunit McrC; Provisional), PRK11331 (5-methylcytosine-specific restriction enzyme subunit McrB; Provisional)