myRT

myRT report for GCA_008801705.1_ASM880170v1

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Seq: VZPE01000010.1 Ochrobactrum pituitosum strain CCUG 50899 contig_0000010, whole genome shotgun sequence (159258 bp)
Overview 1 RT 1: 116785-122279 bp Neighborhood of RT #1 [116785, 122279] RVT-Retrons Feature: gene Location: 116785-117249 bp Feature: gene Location: 117313-118452 bp Feature: gene Location: 118544-119770 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 118829-119495 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 8829-1 1 9495 bp Feature: gene Location: 119950-121185 bp Feature: gene Location: 121266-122279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: VZPE01000011.1 Ochrobactrum pituitosum strain CCUG 50899 contig_0000011, whole genome shotgun sequence (106233 bp)
Overview 1 RT 1: 48115-52356 bp Neighborhood of RT #1 [48115, 52367] Phage_int_SAM_1 INT_RitC_C_like ArdC RVT-GII Intron_maturas2 HNHc ArdC Feature: gene Location: 48115-49107 bp Feature: domain Description: Phage_int_SAM_1 Location: 48157-48403 bp Feature: domain Description: Phage_int_SAM_1 Location: 48157-48403 bp Feature: domain Description: INT_RitC_C_like Location: 48493-49030 bp Feature: domain Description: INT_RitC_C_like Location: 48493-49030 bp Feature: gene Location: 49151-49378 bp Feature: domain Description: ArdC Location: 49163-49346 bp Feature: domain Description: ArdC Location: 49163-49346 bp Feature: gene Location: 49450-51366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49717-50554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49717-50554 bp Feature: domain Description: Intron_maturas2 Location: 50635-50926 bp Feature: domain Description: Intron_maturas2 Location: 50635-5092 6 bp Feature: domain Description: HNHc Note: nucleases Location: 51088-51247 bp Feature: domain Description: HNHc Note: nucleases Location: 51088-512 47 bp Feature: gene Location: 51608-51958 bp Feature: gene Location: 51978-52367 bp Feature: domain Description: ArdC Location: 51999-52356 bp Feature: domain Description: ArdC Location: 51999-52 356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), ArdC (COG4227), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)