myRT

myRT report for GCA_008801825.1_ASM880182v1

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Seq: VZOY01000006.1 Fusobacterium naviforme strain CCUG 50052 contig_0000006, whole genome shotgun sequence (250397 bp)
Overview 1 RT 1: 120068-122580 bp 2 RT 2: 196339-199813 bp Neighborhood of RT #1 [120068, 122580] RVT-DGRs Neighborhood of RT #2 [196339, 200289] Zn-ribbon_8 Zn-ribbon_8 Sec34 RVT-DGRs Avd_like FGE-sulfatase Feature: gene Location: 120068-120397 bp Feature: gene Location: 120408-120596 bp Feature: gene Location: 120709-121101 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 120712-120865 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 2071 2-1 20865 bp Feature: gene Location: 121177-122220 bp Feature: gene Location: 122236-122580 bp Feature: gene Location: 196339-196566 bp Feature: domain Description: Zn-ribbon_8 Location: 196351-196414 bp Feature: domain Description: Zn-ribbon_8 Location: 1 96351 -1 9641 4 bp Feature: domain Description: Zn-ribbon_8 Location: 196468-196507 bp Feature: domain Description: Zn-ribbon_8 Location: 1 96468-1 96507 bp Feature: gene Location: 196753-197217 bp Feature: domain Description: Sec34 Location: 196879-197149 bp Feature: domain Description: Sec34 Location: 1 96879-1 971 49 bp Feature: gene Location: 197260-198375 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 197479-198127 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 97479-1 981 27 bp Feature: gene Location: 198682-199041 bp Feature: domain Description: Avd_like Location: 198715-199018 bp Feature: domain Description: Avd_like Location: 1 9871 5-1 9901 8 bp Feature: gene Location: 199219-200289 bp Feature: domain Description: FGE-sulfatase Location: 199489-199813 bp Feature: domain Description: FGE-sulfatase Location: 1 99489-1 9981 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Zn-ribbon_8 (pfam09723), Sec34 (pfam04136), Avd_like (cd16376), FGE-sulfatase (pfam03781)

Seq: VZOY01000009.1 Fusobacterium naviforme strain CCUG 50052 contig_0000009, whole genome shotgun sequence (41661 bp)
Overview 1 RT 1: 10247-15479 bp Neighborhood of RT #1 [10247, 15479] PrgI RVT-GII HNHc Maff2 Feature: gene Location: 10247-10672 bp Feature: domain Description: PrgI Location: 10268-10538 bp Feature: domain Description: PrgI Location: 102 68-10538 bp Feature: gene Location: 10730-11596 bp Feature: gene Location: 11957-13702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12152-12890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 152 -12 890 bp Feature: domain Description: HNHc Note: nucleases Location: 13436-13586 bp Feature: domain Description: HNHc Note: nucleases Location: 13436-13586 bp Feature: gene Location: 14569-14700 bp Feature: domain Description: Maff2 Location: 14572-14698 bp Feature: domain Description: Maff2 Location: 14572 -14698 bp Feature: gene Location: 14943-15479 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrgI (pfam12666), RVT-GII, HNHc (smart00507), Maff2 (pfam12750)