myRT

myRT report for GCA_008802135.1_ASM880213v1

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Seq: VZOJ01000002.1 Burkholderia latens strain CCUG 54555 contig_0000002, whole genome shotgun sequence (266749 bp)
Overview 1 RT 1: 161759-166959 bp Neighborhood of RT #1 [161759, 166988] Lar_restr_allev CSP_CDS RVT-GII GIIM Phage_int_SAM_2 INT_Rci_Hp1_C HTH_8 Feature: gene Location: 161759-162430 bp Feature: domain Description: Lar_restr_allev Location: 161768-162053 bp Feature: domain Description: Lar_restr_allev Location: 1 61 768-1 62053 bp Feature: gene Location: 162512-163093 bp Feature: domain Description: CSP_CDS Location: 162515-162695 bp Feature: domain Description: CSP_CDS Location: 1 6251 5-1 62695 bp Feature: gene Location: 163172-164461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163412-164030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6341 2-1 64030 bp Feature: domain Description: GIIM Note: maturase Location: 164081-164285 bp Feature: domain Description: GIIM Note: maturase Location: 1 64081 -1 64285 bp Feature: gene Location: 165386-165757 bp Feature: gene Location: 165846-166988 bp Feature: domain Description: Phage_int_SAM_2 Location: 165987-166206 bp Feature: domain Description: Phage_int_SAM_2 Location: 1 65987-1 66206 bp Feature: domain Description: INT_Rci_Hp1_C Location: 166320-166692 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 1 66320-1 66692 bp Feature: domain Description: HTH_8 Location: 166884-166959 bp Feature: domain Description: HTH_8 Location: 1 66884-1 66959 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lar_restr_allev (pfam14354), CSP_CDS (cd04458), RVT-GII, GIIM (pfam08388), Phage_int_SAM_2 (pfam12834), INT_Rci_Hp1_C (cd00796), HTH_8 (pfam02954)

Seq: VZOJ01000230.1 Burkholderia latens strain CCUG 54555 contig_0000230, whole genome shotgun sequence (1851 bp)
Overview 1 RT 1: 610-1603 bp Neighborhood of RT #1 [610, 1761] RVT-GII GIIM Feature: gene Location: 610-1761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 727-1342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 7-1342 bp Feature: domain Description: GIIM Note: maturase Location: 1402-1603 bp Feature: domain Description: GIIM Note: maturase Location: 1402 -1603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)