myRT

myRT report for GCA_008830585.1_ASM883058v1

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Seq: WARD01000002.1 Klebsiella pneumoniae strain 42338 contig_2, whole genome shotgun sequence (35817 bp)
Overview 1 RT 1: 2-3860 bp Neighborhood of RT #1 [2, 3862] PRK15207 RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 2-361 bp Feature: domain Description: PRK15207 Location: 56-296 bp Feature: domain Description: PRK1 5207 Location: 56-296 bp Feature: gene Location: 361-2439 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 769-1213 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 769-1 21 3 bp Feature: gene Location: 2496-2936 bp Feature: domain Description: Integrase_1 Location: 2502-2718 bp Feature: domain Description: Integrase_1 Location: 2502-271 8 bp Feature: gene Location: 3197-3862 bp Feature: domain Description: INT_P4_C Location: 3302-3860 bp Feature: domain Description: INT_P4_C Location: 3302-3860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15207 (outer membrane usher protein LpfC), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: WARD01000054.1 Klebsiella pneumoniae strain 42338 contig_54, whole genome shotgun sequence (1916 bp)
Overview 1 RT 1: 59-1915 bp Neighborhood of RT #1 [59, 1915] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WARD01000071.1 Klebsiella pneumoniae strain 42338 contig_71, whole genome shotgun sequence (4088 bp)
Overview 1 RT 1: 153-2908 bp Neighborhood of RT #1 [153, 2908] RVT-GII Feature: gene Location: 153-1640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 558-1248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 558-1248 bp Feature: gene Location: 1770-2390 bp Feature: gene Location: 2399-2908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII