myRT

myRT report for GCA_008867305.1_ASM886730v1

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Seq: VJOG01000038.1 Klebsiella pneumoniae strain 3C25 NODE_38_length_28551_cov_48.8044, whole genome shotgun sequence (28551 bp)
Overview 1 RT 1: 7419-10859 bp Neighborhood of RT #1 [7419, 10859] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7419-7841 bp Feature: domain Description: DUF1380 Location: 7422-7716 bp Feature: domain Description: DUF1 380 Location: 7422-771 6 bp Feature: gene Location: 7838-8029 bp Feature: gene Location: 8343-10010 bp Feature: RT Description: RVT_N Location: 8391-8628 bp Feature: RT Description: RVT_N Location: 8391 -8628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8679-9321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8679-9321 bp Feature: domain Description: GIIM Note: maturase Location: 9372-9606 bp Feature: domain Description: GIIM Note: maturase Location: 9372-9606 bp Feature: domain Description: HNHc Note: nucleases Location: 9816-9975 bp Feature: domain Description: HNHc Note: nucleases Location: 981 6-9975 bp Feature: gene Location: 10290-10472 bp Feature: gene Location: 10584-10859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: VJOG01000050.1 Klebsiella pneumoniae strain 3C25 NODE_50_length_11862_cov_56.9961, whole genome shotgun sequence (11862 bp)
Overview 1 RT 1: 1-3142 bp Neighborhood of RT #1 [1, 3142] Rve RVT-GII Feature: gene Location: 1-183 bp Feature: domain Description: Rve Location: 16-184 bp Feature: domain Description: Rve Location: 16-184 bp Feature: gene Location: 387-1874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 792-1482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 792 -1482 bp Feature: gene Location: 2004-2624 bp Feature: gene Location: 2633-3142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII

Seq: VJOG01000086.1 Klebsiella pneumoniae strain 3C25 NODE_87_length_1892_cov_539.88, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1891 bp Neighborhood of RT #1 [59, 1891] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII