myRT

myRT report for GCA_008867345.1_ASM886734v1

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Seq: VJOF01000038.1 Klebsiella pneumoniae strain 3C23 NODE_38_length_28537_cov_53.477, whole genome shotgun sequence (28537 bp)
Overview 1 RT 1: 7412-10852 bp Neighborhood of RT #1 [7412, 10852] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7412-7834 bp Feature: domain Description: DUF1380 Location: 7415-7709 bp Feature: domain Description: DUF1 380 Location: 741 5-7709 bp Feature: gene Location: 7831-8022 bp Feature: gene Location: 8336-10003 bp Feature: RT Description: RVT_N Location: 8384-8621 bp Feature: RT Description: RVT_N Location: 8384-8621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8672-9314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8672-931 4 bp Feature: domain Description: GIIM Note: maturase Location: 9365-9599 bp Feature: domain Description: GIIM Note: maturase Location: 9365-9599 bp Feature: domain Description: HNHc Note: nucleases Location: 9809-9968 bp Feature: domain Description: HNHc Note: nucleases Location: 9809-9968 bp Feature: gene Location: 10283-10465 bp Feature: gene Location: 10577-10852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: VJOF01000050.1 Klebsiella pneumoniae strain 3C23 NODE_50_length_11855_cov_73.9639, whole genome shotgun sequence (11855 bp)
Overview 1 RT 1: 3-3135 bp Neighborhood of RT #1 [3, 3135] Rve RVT-GII Feature: gene Location: 3-176 bp Feature: domain Description: Rve Location: 18-177 bp Feature: domain Description: Rve Location: 18-177 bp Feature: gene Location: 380-1867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 785-1475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 785-1475 bp Feature: gene Location: 1997-2617 bp Feature: gene Location: 2626-3135 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII

Seq: VJOF01000085.1 Klebsiella pneumoniae strain 3C23 NODE_87_length_1892_cov_763.799, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1891 bp Neighborhood of RT #1 [59, 1891] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII