myRT

myRT report for GCA_008867615.1_ASM886761v1

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Seq: VSKH01000067.1 Klebsiella pneumoniae strain 20180848 1-20180848_S1_L001_R1_001_(paired)_contig_67, whole genome shotgun sequence (28199 bp)
Overview 1 RT 1: 14369-19213 bp Neighborhood of RT #1 [14369, 19215] HTH_17 PHA02517 RVT-GII GIIM PHA02517 PFDH_like Feature: gene Location: 14369-14650 bp Feature: domain Description: HTH_17 Location: 14396-14540 bp Feature: domain Description: HTH_1 7 Location: 1 4396-1 4540 bp Feature: gene Location: 14730-15194 bp Feature: domain Description: PHA02517 Location: 14793-15129 bp Feature: domain Description: PHA0251 7 Location: 1 4793-1 51 29 bp Feature: gene Location: 15782-17305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16055-16787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6055-1 6787 bp Feature: domain Description: GIIM Note: maturase Location: 16865-17060 bp Feature: domain Description: GIIM Note: maturase Location: 1 6865-1 7060 bp Feature: gene Location: 17482-17679 bp Feature: domain Description: PHA02517 Location: 17485-17635 bp Feature: domain Description: PHA0251 7 Location: 1 7485-1 7635 bp Feature: gene Location: 18082-19215 bp Feature: domain Description: PFDH_like Location: 18085-19213 bp Feature: domain Description: PFDH_like Location: 1 8085-1 921 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PFDH_like (cd08282)

Seq: VSKH01000077.1 Klebsiella pneumoniae strain 20180848 1-20180848_S1_L001_R1_001_(paired)_contig_77, whole genome shotgun sequence (9162 bp)
Overview 1 RT 1: 5160-8987 bp Neighborhood of RT #1 [5160, 8987] HHA RVT-GII INT_Cre_C Feature: gene Location: 5160-5411 bp Feature: domain Description: HHA Location: 5208-5391 bp Feature: domain Description: HHA Location: 52 08-5391 bp Feature: gene Location: 5706-5918 bp Feature: gene Location: 5993-7261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6299-6833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 99-6833 bp Feature: gene Location: 7468-8604 bp Feature: domain Description: INT_Cre_C Location: 7891-8545 bp Feature: domain Description: INT_Cre_C Location: 7891-8545 bp Feature: gene Location: 8670-8987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)