myRT

myRT report for GCA_008867705.1_ASM886770v1

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Seq: VSKD01000002.1 Klebsiella pneumoniae strain 20180291 30-20180291_S34_L001_R1_001_(paired)_contig_2, whole genome shotgun sequence (24739 bp)
Overview 1 RT 1: 9282-12466 bp Neighborhood of RT #1 [9282, 12466] PRK10276 RVT-GII Feature: gene Location: 9282-9707 bp Feature: domain Description: PRK10276 Location: 9285-9693 bp Feature: domain Description: PRK1 0276 Location: 9285-9693 bp Feature: gene Location: 9825-10058 bp Feature: gene Location: 10109-11620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10514-11228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 051 4-1 1 228 bp Feature: gene Location: 11854-12084 bp Feature: gene Location: 12143-12466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: VSKD01000034.1 Klebsiella pneumoniae strain 20180291 30-20180291_S34_L001_R1_001_(paired)_contig_34, whole genome shotgun sequence (310562 bp)
Overview 1 RT 1: 28632-35485 bp Neighborhood of RT #1 [28632, 35502] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 28632-29297 bp Feature: domain Description: INT_P4_C Location: 28737-29295 bp Feature: domain Description: INT_P4_C Location: 2 8737-2 92 95 bp Feature: gene Location: 29558-29998 bp Feature: domain Description: Integrase_1 Location: 29564-29780 bp Feature: domain Description: Integrase_1 Location: 2 9564-2 9780 bp Feature: gene Location: 30055-32133 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30463-30907 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30463-30907 bp Feature: gene Location: 32133-34742 bp Feature: domain Description: FimD Location: 32190-34731 bp Feature: domain Description: FimD Location: 32 190-34731 bp Feature: gene Location: 34774-35502 bp Feature: domain Description: FimC Location: 34807-35485 bp Feature: domain Description: FimC Location: 34807-35485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)