myRT

myRT report for GCA_008867725.1_ASM886772v1

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Seq: VSKA01000077.1 Klebsiella pneumoniae strain 20180550 20-20180550-1_S21_L001_R1_001_(paired)_contig_77, whole genome shotgun sequence (101490 bp)
Overview 1 RT 1: 14709-21559 bp Neighborhood of RT #1 [14709, 21579] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 14709-15374 bp Feature: domain Description: INT_P4_C Location: 14814-15372 bp Feature: domain Description: INT_P4_C Location: 1 481 4-1 5372 bp Feature: gene Location: 15635-16075 bp Feature: domain Description: Integrase_1 Location: 15641-15857 bp Feature: domain Description: Integrase_1 Location: 1 5641 -1 5857 bp Feature: gene Location: 16132-18210 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 16540-16984 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 6540-1 6984 bp Feature: gene Location: 18210-20819 bp Feature: domain Description: FimD Location: 18267-20808 bp Feature: domain Description: FimD Location: 1 8267-20808 bp Feature: gene Location: 20851-21579 bp Feature: domain Description: FimC Location: 20884-21559 bp Feature: domain Description: FimC Location: 20884-21 559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)