myRT

myRT report for GCA_008868035.1_ASM886803v1

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Seq: VSJP01000124.1 Klebsiella pneumoniae strain A03/17 28-ANAGUAL_S22_L001_R1_001_(paired)_contig_124, whole genome shotgun sequence (14040 bp)
Overview 1 RT 1: 61-2362 bp Neighborhood of RT #1 [61, 2376] RVT-GII PRK10276 Feature: gene Location: 61-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1 1 56 bp Feature: gene Location: 1554-1721 bp Feature: gene Location: 1951-2376 bp Feature: domain Description: PRK10276 Location: 1954-2362 bp Feature: domain Description: PRK1 0276 Location: 1 954-2362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: VSJP01000125.1 Klebsiella pneumoniae strain A03/17 28-ANAGUAL_S22_L001_R1_001_(paired)_contig_125, whole genome shotgun sequence (9019 bp)
Overview 1 RT 1: 4293-7630 bp Neighborhood of RT #1 [4293, 7695] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 4293-4532 bp Feature: gene Location: 4595-5050 bp Feature: domain Description: PHA02517 Location: 4604-5024 bp Feature: domain Description: PHA02 517 Location: 4604-502 4 bp Feature: gene Location: 5146-6669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5419-6151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5419-6151 bp Feature: domain Description: GIIM Note: maturase Location: 6226-6424 bp Feature: domain Description: GIIM Note: maturase Location: 62 2 6-642 4 bp Feature: gene Location: 6623-7048 bp Feature: gene Location: 7261-7695 bp Feature: domain Description: PHA02517 Location: 7363-7630 bp Feature: domain Description: PHA02 517 Location: 7363-7630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: VSJP01000023.1 Klebsiella pneumoniae strain A03/17 28-ANAGUAL_S22_L001_R1_001_(paired)_contig_23, whole genome shotgun sequence (28044 bp)
Overview 1 RT 1: 1-6563 bp Neighborhood of RT #1 [1, 6565] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 1-423 bp Feature: domain Description: FimC Location: 22-406 bp Feature: domain Description: FimC Location: 22-406 bp Feature: gene Location: 455-3064 bp Feature: domain Description: FimD Location: 512-3053 bp Feature: domain Description: FimD Location: 512-3 053 bp Feature: gene Location: 3064-5142 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3472-3916 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 472-3 916 bp Feature: gene Location: 5199-5639 bp Feature: domain Description: Integrase_1 Location: 5205-5421 bp Feature: domain Description: Integrase_1 Location: 5205-5421 bp Feature: gene Location: 5900-6565 bp Feature: domain Description: INT_P4_C Location: 6005-6563 bp Feature: domain Description: INT_P4_C Location: 6005-6563 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: VSJP01000004.1 Klebsiella pneumoniae strain A03/17 28-ANAGUAL_S22_L001_R1_001_(paired)_contig_4, whole genome shotgun sequence (296644 bp)
Overview 1 RT 1: 42772-46134 bp Neighborhood of RT #1 [42772, 46134] PRK10276 RVT-GII Feature: gene Location: 42772-43089 bp Feature: domain Description: PRK10276 Location: 42778-42892 bp Feature: domain Description: PRK10276 Location: 4 2778-4 2892 bp Feature: gene Location: 43089-43328 bp Feature: gene Location: 43406-44890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43808-44498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 3808-4 4 4 98 bp Feature: gene Location: 44944-45090 bp Feature: gene Location: 45382-46134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII