myRT

myRT report for GCA_008923195.1_ASM892319v1

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Seq: WBSC01000006.1 Klebsiella pneumoniae strain GDQ8D112M contig_15, whole genome shotgun sequence (35217 bp)
Overview 1 RT 1: 21959-25130 bp Neighborhood of RT #1 [21959, 25132] PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 21959-22642 bp Feature: domain Description: PRK10276 Location: 22262-22625 bp Feature: domain Description: PRK1 0276 Location: 22262-22625 bp Feature: gene Location: 22796-23161 bp Feature: gene Location: 23273-24283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23279-23891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23279-23891 bp Feature: gene Location: 24435-24710 bp Feature: domain Description: InsA Location: 24438-24702 bp Feature: domain Description: InsA Location: 24438-24702 bp Feature: gene Location: 24755-25132 bp Feature: domain Description: DDE_Tnp_IS1 Location: 24758-25130 bp Feature: domain Description: DDE_Tnp_IS1 Location: 24758-251 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: WBSC01000055.1 Klebsiella pneumoniae strain GDQ8D112M contig_8, whole genome shotgun sequence (138444 bp)
Overview 1 RT 1: 48415-55585 bp Neighborhood of RT #1 [48415, 55602] EAL RVT-UG4 FimD FimC Feature: gene Location: 48415-48621 bp Feature: gene Location: 48711-49565 bp Feature: domain Description: EAL Location: 49395-49548 bp Feature: domain Description: EAL Location: 49395-49548 bp Feature: gene Location: 50203-52233 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 50611-51055 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 50611-51055 bp Feature: gene Location: 52233-54842 bp Feature: domain Description: FimD Location: 52290-54831 bp Feature: domain Description: FimD Location: 52 2 90-54831 bp Feature: gene Location: 54874-55602 bp Feature: domain Description: FimC Location: 54922-55585 bp Feature: domain Description: FimC Location: 5492 2 -55585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)