myRT

myRT report for GCA_008923245.1_ASM892324v1

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Seq: WBOS01000011.1 Cytobacillus depressus strain BZ1 NODE_11_length_129266_cov_34.396616, whole genome shotgun sequence (129266 bp)
Overview 1 RT 1: 65205-77193 bp 2 RT 2: 85901-90638 bp Neighborhood of RT #1 [65205, 77193] RibD_C RVT-GII GIIM RVT-GII MFS_MefA_like COG3607 cysteine_hydrolases RVT-GII Neighborhood of RT #2 [85901, 91222] bMG3 RVT-GII Cupin_1 DUF4158 Feature: gene Location: 65205-65819 bp Feature: domain Description: RibD_C Location: 65250-65790 bp Feature: domain Description: RibD_C Location: 65250-65790 bp Feature: gene Location: 66033-66470 bp Feature: gene Location: 66722-67312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66725-66932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66725-66932 bp Feature: domain Description: GIIM Note: maturase Location: 67022-67226 bp Feature: domain Description: GIIM Note: maturase Location: 67022-67226 bp Feature: gene Location: 67408-68049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67663-68026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67663-68026 bp Feature: gene Location: 68751-69989 bp Feature: domain Description: MFS_MefA_like Location: 68778-69942 bp Feature: domain Description: MFS_MefA_like Location: 68778-69942 bp Feature: gene Location: 71039-71440 bp Feature: domain Description: COG3607 Location: 71042-71426 bp Feature: domain Description: COG3607 Location: 71 042-71 426 bp Feature: gene Location: 73246-73872 bp Feature: domain Description: cysteine_hydrolases Location: 73276-73816 bp Feature: domain Description: cysteine_hydrolases Location: 73276-7381 6 bp Feature: gene Location: 74009-74437 bp Feature: gene Location: 74649-75977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74904-75597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74904-75597 bp Feature: gene Location: 76540-76713 bp Feature: gene Location: 76978-77193 bp Feature: gene Location: 85901-86209 bp Feature: gene Location: 86330-86890 bp Feature: domain Description: bMG3 Location: 86462-86606 bp Feature: domain Description: bMG3 Location: 86462-86606 bp Feature: gene Location: 87150-88478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87405-88098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87405-88098 bp Feature: gene Location: 89336-89911 bp Feature: domain Description: Cupin_1 Location: 89459-89813 bp Feature: domain Description: Cupin_1 Location: 89459-8981 3 bp Feature: gene Location: 90143-91222 bp Feature: domain Description: DUF4158 Location: 90152-90638 bp Feature: domain Description: DUF41 58 Location: 901 52-90638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RibD_C (pfam01872), RVT-GII, GIIM (pfam08388), MFS_MefA_like (cd06173), COG3607 (Predicted lactoylglutathione lyase ), cysteine_hydrolases (cl00220), bMG3, Cupin_1 (smart00835), DUF4158 (pfam13700)

Seq: WBOS01000025.1 Cytobacillus depressus strain BZ1 NODE_25_length_44668_cov_32.697264, whole genome shotgun sequence (44668 bp)
Overview 1 RT 1: 39512-44485 bp Neighborhood of RT #1 [39512, 44502] RimL CspC RVT-GII HNHc DinB_2 Feature: gene Location: 39512-40066 bp Feature: domain Description: RimL Location: 39533-40043 bp Feature: domain Description: RimL Location: 39533-40043 bp Feature: gene Location: 40582-40782 bp Feature: domain Description: CspC Location: 40585-40777 bp Feature: domain Description: CspC Location: 40585-40777 bp Feature: gene Location: 41827-43599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42085-42781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 085-42 781 bp Feature: domain Description: HNHc Note: nucleases Location: 43354-43489 bp Feature: domain Description: HNHc Note: nucleases Location: 43354-43489 bp Feature: gene Location: 43978-44502 bp Feature: domain Description: DinB_2 Location: 44080-44485 bp Feature: domain Description: DinB_2 Location: 44080-44485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), CspC (COG1278), RVT-GII, HNHc (smart00507), DinB_2 (pfam12867)

Seq: WBOS01000039.1 Cytobacillus depressus strain BZ1 NODE_39_length_1964_cov_289.144872, whole genome shotgun sequence (1964 bp)
Overview 1 RT 1: 137-1626 bp Neighborhood of RT #1 [137, 1626] RVT-GII GIIM Feature: gene Location: 137-1423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431-1061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 1-1061 bp Feature: domain Description: GIIM Note: maturase Location: 1142-1376 bp Feature: domain Description: GIIM Note: maturase Location: 1142-13 76 bp Feature: gene Location: 1495-1626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)