myRT

myRT report for GCA_008923815.1_ASM892381v1

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Seq: WBOZ01000056.1 Bacillus cereus strain CH111_4T NODE_130_length_222533_cov_46.175457, whole genome shotgun sequence (222671 bp)
Overview 1 RT 1: 61174-65302 bp Neighborhood of RT #1 [61174, 65302] PRK02186 RVT-GII GIIM Feature: gene Location: 61174-62400 bp Feature: domain Description: PRK02186 Location: 61180-62389 bp Feature: domain Description: PRK021 86 Location: 61 1 80-62389 bp Feature: gene Location: 63047-63244 bp Feature: gene Location: 63576-64442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63582-64059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63582-64059 bp Feature: domain Description: GIIM Note: maturase Location: 64134-64359 bp Feature: domain Description: GIIM Note: maturase Location: 641 34-64359 bp Feature: gene Location: 64667-64978 bp Feature: gene Location: 65090-65302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02186 (argininosuccinate lyase; Provisional), RVT-GII, GIIM (pfam08388)

Seq: WBOZ01000019.1 Bacillus cereus strain CH111_4T NODE_23_length_322395_cov_43.989803, whole genome shotgun sequence (322533 bp)
Overview 1 RT 1: 21665-26962 bp Neighborhood of RT #1 [21665, 27135] DUF3891 BHL RVT-GII GIIM HNHc Sfp Feature: gene Location: 21665-22432 bp Feature: domain Description: DUF3891 Location: 21668-22352 bp Feature: domain Description: DUF3891 Location: 2 1668-2 2 352 bp Feature: gene Location: 22637-22825 bp Feature: domain Description: BHL Location: 22640-22790 bp Feature: domain Description: BHL Location: 2 2 640-2 2 790 bp Feature: gene Location: 23594-25483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23891-24629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3891-2 462 9 bp Feature: domain Description: GIIM Note: maturase Location: 24716-24926 bp Feature: domain Description: GIIM Note: maturase Location: 2 4716-2 492 6 bp Feature: domain Description: HNHc Note: nucleases Location: 25238-25400 bp Feature: domain Description: HNHc Note: nucleases Location: 2 52 38-2 5400 bp Feature: gene Location: 25819-26361 bp Feature: gene Location: 26386-27135 bp Feature: domain Description: Sfp Location: 26470-26962 bp Feature: domain Description: Sfp Location: 2 6470-2 6962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3891 (pfam13030), BHL (smart00411), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Sfp (COG2091)

Seq: WBOZ01000023.1 Bacillus cereus strain CH111_4T NODE_27_length_358763_cov_57.559772, whole genome shotgun sequence (358901 bp)
Overview 1 RT 1: 181120-186900 bp 2 RT 2: 243438-247074 bp 3 RT 3: 286359-294029 bp Neighborhood of RT #1 [181120, 186900] DUF3854 LPD1 RVT-GII HNHc Neighborhood of RT #2 [243438, 247115] NT_KNTase_like RVT-GII HNHc HEPN Neighborhood of RT #3 [286359, 294029] AdoMet_MTases RVT_N RVT-GII GIIM HNHc RVT-GII GIIM HNHc Feature: gene Location: 181120-182433 bp Feature: domain Description: DUF3854 Location: 182050-182401 bp Feature: domain Description: DUF3 854 Location: 182050-182401 bp Feature: gene Location: 182423-183220 bp Feature: domain Description: LPD1 Location: 182969-183164 bp Feature: domain Description: LPD1 Location: 182969-183 164 bp Feature: gene Location: 183292-185088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183586-184282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183 586-184282 bp Feature: domain Description: HNHc Note: nucleases Location: 184882-184957 bp Feature: domain Description: HNHc Note: nucleases Location: 184882-184957 bp Feature: gene Location: 185120-185431 bp Feature: gene Location: 185809-186900 bp Feature: gene Location: 243438-243836 bp Feature: domain Description: NT_KNTase_like Location: 243513-243813 bp Feature: domain Description: NT_KNTase_like Location: 243 513 -243 813 bp Feature: gene Location: 244395-244598 bp Feature: gene Location: 244595-245626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244916-245621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244916-245621 bp Feature: gene Location: 245762-246526 bp Feature: domain Description: HNHc Note: nucleases Location: 246248-246410 bp Feature: domain Description: HNHc Note: nucleases Location: 246248-246410 bp Feature: gene Location: 246672-247115 bp Feature: domain Description: HEPN Location: 246726-247074 bp Feature: domain Description: HEPN Location: 246726-247074 bp Feature: gene Location: 286359-287099 bp Feature: domain Description: AdoMet_MTases Location: 286470-286842 bp Feature: domain Description: AdoMet_MTases Location: 286470-286842 bp Feature: gene Location: 287107-287337 bp Feature: gene Location: 287683-289491 bp Feature: RT Description: RVT_N Location: 287734-287974 bp Feature: RT Description: RVT_N Location: 28773 4-287974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288034-288688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28803 4-288688 bp Feature: domain Description: GIIM Note: maturase Location: 288751-288985 bp Feature: domain Description: GIIM Note: maturase Location: 288751-288985 bp Feature: domain Description: HNHc Note: nucleases Location: 289198-289345 bp Feature: domain Description: HNHc Note: nucleases Location: 289198-2893 45 bp Feature: gene Location: 290482-292614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 290773-291862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 290773 -291862 bp Feature: domain Description: GIIM Note: maturase Location: 291946-292174 bp Feature: domain Description: GIIM Note: maturase Location: 291946-292174 bp Feature: domain Description: HNHc Note: nucleases Location: 292438-292594 bp Feature: domain Description: HNHc Note: nucleases Location: 29243 8-292594 bp Feature: gene Location: 292646-293299 bp Feature: gene Location: 293316-294029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3854 (pfam12965), LPD1 (pfam18796), RVT-GII, HNHc (smart00507), NT_KNTase_like (cd05403), HEPN (smart00748), AdoMet_MTases (cl17173), RVT_N (pfam13655), GIIM (pfam08388)

Seq: WBOZ01000026.1 Bacillus cereus strain CH111_4T NODE_30_length_309278_cov_47.092663, whole genome shotgun sequence (309416 bp)
Overview 1 RT 1: 79255-84449 bp Neighborhood of RT #1 [79255, 84460] UvrD RVT-GII Intron_maturas2 HNHc UvrD Spore-coat_CotZ Feature: gene Location: 79255-80046 bp Feature: domain Description: UvrD Location: 79408-80035 bp Feature: domain Description: UvrD Location: 794 08-80035 bp Feature: gene Location: 80066-80383 bp Feature: gene Location: 80618-82456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80882-81734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80882-81734 bp Feature: domain Description: Intron_maturas2 Location: 81830-82166 bp Feature: domain Description: Intron_maturas2 Location: 81830-82166 bp Feature: domain Description: HNHc Note: nucleases Location: 82274-82427 bp Feature: domain Description: HNHc Note: nucleases Location: 82274 -824 27 bp Feature: gene Location: 82594-83847 bp Feature: domain Description: UvrD Location: 82597-83830 bp Feature: domain Description: UvrD Location: 82597-83830 bp Feature: gene Location: 83990-84460 bp Feature: domain Description: Spore-coat_CotZ Location: 84002-84449 bp Feature: domain Description: Spore-coat_CotZ Location: 84 002-84 4 4 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrD (COG0210), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Spore-coat_CotZ (pfam10612)

Seq: WBOZ01000007.1 Bacillus cereus strain CH111_4T NODE_7_length_361591_cov_46.505749, whole genome shotgun sequence (361729 bp)
Overview 1 RT 1: 78578-81746 bp Neighborhood of RT #1 [78578, 81817] LbH_gamma_CA RVT-GII Intron_maturas2 KOG4768 CwlA Feature: gene Location: 78578-79273 bp Feature: domain Description: LbH_gamma_CA Location: 78701-79220 bp Feature: domain Description: LbH_gamma_CA Location: 78701-79220 bp Feature: gene Location: 79873-80226 bp Feature: gene Location: 80230-80937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80290-80575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80290-805 75 bp Feature: domain Description: Intron_maturas2 Location: 80659-80920 bp Feature: domain Description: Intron_maturas2 Location: 8065 9-80920 bp Feature: gene Location: 80918-81295 bp Feature: domain Description: KOG4768 Location: 80921-81290 bp Feature: domain Description: KOG4768 Location: 80921-81290 bp Feature: gene Location: 81422-81817 bp Feature: domain Description: CwlA Location: 81425-81746 bp Feature: domain Description: CwlA Location: 81425 -81746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LbH_gamma_CA (cd00710), RVT-GII, Intron_maturas2 (pfam01348), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), CwlA (COG5632)