myRT

myRT report for GCA_008932275.1_ASM893227v1

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Seq: WBVZ01000082.1 Ochrobactrum tritici strain LMG 401 OTR401_128_1931_182, whole genome shotgun sequence (1931 bp)
Overview 1 RT 1: 110-1682 bp Neighborhood of RT #1 [110, 1864] RVT-GII GIIM Feature: gene Location: 110-298 bp Feature: gene Location: 431-1864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 800-1418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 800-1 41 8 bp Feature: domain Description: GIIM Note: maturase Location: 1466-1682 bp Feature: domain Description: GIIM Note: maturase Location: 1 466-1 682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WBVZ01000020.1 Ochrobactrum tritici strain LMG 401 OTR401_20_87k_30, whole genome shotgun sequence (87770 bp)
Overview 1 RT 1: 46233-48996 bp Neighborhood of RT #1 [46233, 49049] fkbM_fam RVT-GII HTH_Tnp_1 Feature: gene Location: 46233-47249 bp Feature: domain Description: fkbM_fam Location: 46353-46779 bp Feature: domain Description: fkbM_fam Location: 46353-46779 bp Feature: gene Location: 47558-47851 bp Feature: gene Location: 47995-48312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48007-48262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48007-482 62 bp Feature: gene Location: 48510-48734 bp Feature: gene Location: 48783-49049 bp Feature: domain Description: HTH_Tnp_1 Location: 48789-48996 bp Feature: domain Description: HTH_Tnp_1 Location: 48789-48996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fkbM_fam (TIGR01444), RVT-GII, HTH_Tnp_1 (pfam01527)

Seq: WBVZ01000008.1 Ochrobactrum tritici strain LMG 401 OTR401_8_155k_32, whole genome shotgun sequence (155220 bp)
Overview 1 RT 1: 149158-155111 bp Neighborhood of RT #1 [149158, 155111] CypX gyrB RVT-GII GIIM Feature: gene Location: 149158-150552 bp Feature: domain Description: CypX Location: 149260-150544 bp Feature: domain Description: CypX Location: 149260-150544 bp Feature: gene Location: 150805-153246 bp Feature: domain Description: gyrB Location: 150841-153244 bp Feature: domain Description: gyrB Location: 150841-153 244 bp Feature: gene Location: 153357-154790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153726-154344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153 726-1543 44 bp Feature: domain Description: GIIM Note: maturase Location: 154392-154608 bp Feature: domain Description: GIIM Note: maturase Location: 1543 92-154608 bp Feature: gene Location: 154923-155111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CypX (COG2124), gyrB (TIGR01059), RVT-GII, GIIM (pfam08388)