myRT

myRT report for GCA_008932675.1_ASM893267v1

Download annotations/find similar RTs

Seq: WBWQ01000001.1 Ochrobactrum anthropi strain LMG 3333 OAN3333_1_1823k_29, whole genome shotgun sequence (1823879 bp)
Overview 1 RT 1: 7591-11426 bp 2 RT 2: 127573-131135 bp Neighborhood of RT #1 [7591, 11449] ArdC RVT-GII Intron_maturas2 HNHc MPTase-PolyVal RelE Neighborhood of RT #2 [127573, 131143] ArdC RVT-GII Intron_maturas2 HNHc ArdC Feature: gene Location: 7591-8022 bp Feature: domain Description: ArdC Location: 7621-8011 bp Feature: domain Description: ArdC Location: 7621 -801 1 bp Feature: gene Location: 8042-8392 bp Feature: gene Location: 8634-10550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8901-9738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8901 -9738 bp Feature: domain Description: Intron_maturas2 Location: 9819-10110 bp Feature: domain Description: Intron_maturas2 Location: 981 9-1 01 1 0 bp Feature: domain Description: HNHc Note: nucleases Location: 10272-10431 bp Feature: domain Description: HNHc Note: nucleases Location: 1 0272-1 0431 bp Feature: gene Location: 10622-11092 bp Feature: domain Description: MPTase-PolyVal Location: 10655-11030 bp Feature: domain Description: MPTase-PolyVal Location: 1 0655-1 1 030 bp Feature: gene Location: 11162-11449 bp Feature: domain Description: RelE Location: 11165-11426 bp Feature: domain Description: RelE Location: 1 1 1 65-1 1 426 bp Feature: gene Location: 127573-128055 bp Feature: domain Description: ArdC Location: 127684-128044 bp Feature: domain Description: ArdC Location: 1 27684-1 28044 bp Feature: gene Location: 128075-128425 bp Feature: gene Location: 128667-130583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128934-129771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 28934-1 29771 bp Feature: domain Description: Intron_maturas2 Location: 129852-130143 bp Feature: domain Description: Intron_maturas2 Location: 1 29852-1 301 43 bp Feature: domain Description: HNHc Note: nucleases Location: 130305-130464 bp Feature: domain Description: HNHc Note: nucleases Location: 1 30305-1 30464 bp Feature: gene Location: 130601-130849 bp Feature: gene Location: 130871-131143 bp Feature: domain Description: ArdC Location: 130874-131135 bp Feature: domain Description: ArdC Location: 1 30874-1 31 1 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MPTase-PolyVal (pfam18818), RelE (pfam06296), ArdC (COG4227), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)